Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 241 a.a., fimbrial chaperone from Escherichia coli ECRC98

 Score =  139 bits (350), Expect = 5e-38
 Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 16/228 (7%)

Query: 16  LFAVGQATAGISLSSTRLVFDGQHKEAGITVRNSGE-DILIQSWVDT--DDADASS--VP 70
           L A   A A I +S TR++++   K+  + + N G   +LIQ+W+DT  D+AD S   VP
Sbjct: 17  LLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVP 76

Query: 71  FAVTPPLARVTSNEQQLLRVIYEG-TGMPTDRESVVWLNVQEIPKASKT----ENTLQLA 125
           F  TPP++RV     Q ++V+Y G T +P DRESV W NV E+P   K     +N LQLA
Sbjct: 77  FTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLA 136

Query: 126 VRQRIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITLQAGAV 185
            R RIK+F+RP+G++     AP ++ W+L        L+ +NP  Y+VS  ++ L++G  
Sbjct: 137 FRTRIKLFYRPSGLQGEPAEAPAKITWKL----NNAQLQANNPTPYYVSFNEVKLESGG- 191

Query: 186 SEHPFDTMMIAPGEQKEFVLKQLP-VTNTAHLKFSSINDYGAQDPYSA 232
             +  ++ M+ P  Q  F +  LP   ++  + F +IND+G     SA
Sbjct: 192 KTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGNIDGSA 239