Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 233 a.a., putative fimbrial chaperone protein ElfD from Escherichia coli ECRC98

 Score =  112 bits (279), Expect = 9e-30
 Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 17/229 (7%)

Query: 6   SLSLCAGLLGLFAVGQA-TAGISLSSTRLVFDGQHKEAGITVRNSGEDI--LIQSWVDTD 62
           ++SL A LL   +   A   G+ L++TRLV+    ++  + VRN+  D+  LIQSWV T 
Sbjct: 11  TVSLTAILLSCSSTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTP 70

Query: 63  DADASSVPFAVTPPLARVTSNEQQLLRVIYEGTGMPTDRESVVWLNVQEIPKASKTE--N 120
           D +  S  F +TPPL  +    + LLR++Y G  +  DRE++ + +V+ +P  +K E  N
Sbjct: 71  D-NKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGN 129

Query: 121 TLQLAVRQRIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITL 180
           TL++A +  IK+F+RP G+      AP +LR          ++ VSNP  Y +++ D+ +
Sbjct: 130 TLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCT----SSADMVTVSNPTPYFITLTDLKI 185

Query: 181 QAGAVSEHPFDTMMIAPGEQKEFVLKQLPVTNTAHLKFSSINDYGAQDP 229
               V        MI+P ++ +F L +      + + + +INDYGA+ P
Sbjct: 186 GGKLVK-----NQMISPFDKYQFSLPK--GAKNSSVTYRTINDYGAETP 227