Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 224 a.a., putative fimbrial chaperone protein ElfD from Escherichia coli ECRC62

 Score =  112 bits (281), Expect = 5e-30
 Identities = 76/229 (33%), Positives = 125/229 (54%), Gaps = 17/229 (7%)

Query: 6   SLSLCAGLLGLFAVGQA-TAGISLSSTRLVFDGQHKEAGITVRNSGEDI--LIQSWVDTD 62
           ++SL A LL   +   A   GI L++TRLV+    ++  + VRN+  D+  LIQSWV T 
Sbjct: 2   TVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTP 61

Query: 63  DADASSVPFAVTPPLARVTSNEQQLLRVIYEGTGMPTDRESVVWLNVQEIPKASKTE--N 120
           D +  S  F +TPPL  +    + LLR++Y G  +  DRE++ + +V+ +P  +K E  N
Sbjct: 62  D-NKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGN 120

Query: 121 TLQLAVRQRIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITL 180
           TL++A +  IK+F+RP G+      AP +LR          ++ VSNP  Y +++ D+ +
Sbjct: 121 TLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCT----SSADMVTVSNPTPYFITLTDLKI 176

Query: 181 QAGAVSEHPFDTMMIAPGEQKEFVLKQLPVTNTAHLKFSSINDYGAQDP 229
               V        MI+P ++ +F L +      + + + +INDYGA+ P
Sbjct: 177 GGKVVK-----NQMISPFDKYQFSLPK--GAKNSSVTYRTINDYGAETP 218