Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 246 a.a., putative fimbrial chaperone YadV from Escherichia fergusonii Becca

 Score =  142 bits (359), Expect = 5e-39
 Identities = 89/239 (37%), Positives = 134/239 (56%), Gaps = 16/239 (6%)

Query: 1   MFF--RYSLSLCAGLLGLFAVGQATAGISLSSTRLVFDGQHKEAGITVRNSGED-ILIQS 57
           MFF  +++ +LC      F+   A A I +S TR+V+  + K   + + N G + +L+QS
Sbjct: 1   MFFNTKHTAALCLASCMAFS-SSAIADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQS 59

Query: 58  WVDTDDADAS----SVPFAVTPPLARVTSNEQQLLRVIYEGTG-MPTDRESVVWLNVQEI 112
           W+DT D +A     +VPF  TPP++R+ +   Q ++++Y  +  +P DRESV W NV E+
Sbjct: 60  WLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEV 119

Query: 113 PK---ASKTENT--LQLAVRQRIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSN 167
           P    A+K  N   LQLA R RIK+F+RP G+   +  AP  L+W  A   GK  LRV N
Sbjct: 120 PPKPDAAKAANQSLLQLAFRTRIKLFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDN 179

Query: 168 PGAYHVSIADITLQAGAVSEHPFDTMMIAPGEQKEFVLKQLP-VTNTAHLKFSSINDYG 225
           P  Y+VS +   L+A     +P D  MIAP       +  +   T++A + F +IND+G
Sbjct: 180 PTPYYVSFSSGDLEANG-KRYPLDMTMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFG 237