Pairwise Alignments

Query, 196 a.a., fimbrial protein from Pseudomonas simiae WCS417

Subject, 173 a.a., fimbria A protein from Pseudomonas simiae WCS417

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 22/185 (11%)

Query: 15  AAGNAFAADPPATPTKAGSGTINFTGSINNDACSVEGIGENKTISVSMGEVSIKDIGTAT 74
           AA  A  A   +    AGSG + F GSI+  ACS+     N+T  V +G ++  ++    
Sbjct: 8   AAAMAILAGSISVANAAGSGEVRFIGSIHEGACSISPETANQT--VDLGAIAKHEL---- 61

Query: 75  APKGNGTLSAENFGMTINCNAGTKVAMIFQPTKGA---GSGIVTGTKVLKLTDGLGAAKN 131
                G    E F + +    G  VA +   T  A   G+G  T    L LT   GAA  
Sbjct: 62  --MAGGRTDGEAFQIDLE---GCDVAALVDKTVTATFTGTGDTTIPGSLALT---GAASG 113

Query: 132 IGIALLDSNGALIDLSSPTAAKVENTLQDSNTTLKFSAAYVTTADAASAVAGRADATLPF 191
            GI  ++  G ++ L +PT  ++   LQD   TL F+ AYV     A+ V G  +A   F
Sbjct: 114 AGI-FMEHAGKVVVLGAPTEPQL---LQDGGNTLAFN-AYVQGHATAAPVPGTFEAITNF 168

Query: 192 TLQYE 196
           TL Y+
Sbjct: 169 TLDYQ 173