Pairwise Alignments

Query, 1052 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  224 bits (570), Expect = 3e-62
 Identities = 189/613 (30%), Positives = 275/613 (44%), Gaps = 96/613 (15%)

Query: 472  LEEARQAADSASQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLQTIQRSS 531
            L+ AR+ A  AS+ KS FLA MSHEIRTPL G+LG   LL  + + PRQ DYL TI++S+
Sbjct: 272  LDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSA 331

Query: 532  TTLFQLISDVLDVSKIEAGQMTLELQDFCPLELTEDCVRTYGAFARSKGLQLYACIDANL 591
              L  +I+++LD SKIEAG++ L+   F   +L +D +      A +K L+L + I  + 
Sbjct: 332  DNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDT 391

Query: 592  PDRLRGDPLRIRQILNNLLSNAIKFTDNGRVVLRLRGLETSDGRVELQWQVSDSGVGIAQ 651
            P  L GDPLR++QIL NL+SNAIKFT  G +V+R    +  +   +L+  V D+G+G++ 
Sbjct: 392  PASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSP 451

Query: 652  AQQHQLFDPFYQAED--ATRQAGAGLGLAICKWLCELMHGQLNVVSEPGLGSSFTLQVAL 709
                 LF  F QA++  A +  G GLGL I K L E M G++ V S PG GS F + + L
Sbjct: 452  QDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNL 511

Query: 710  EPVPGTLADCPVFSPD----TPAVYVRAPEAERTQCMIDWLKRLGLDSRVFAADTPAAAL 765
               P    D     P       A  V   E  R Q +   L+  GL   +FA        
Sbjct: 512  ---PKAHDDAEALPPQPLLGRRAAIVDGHELAR-QALEHQLEDCGLSVSLFA-------- 559

Query: 766  LVDFTHDPAWPGTRIIASAGGP-------------SPAQ---------PYGSDWAVDAND 803
                ++D    G +  + AG P             SP Q          Y     V    
Sbjct: 560  ----SYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQQLERYHCQCVVLCPT 615

Query: 804  VRAIAWAVYLAQHGAEADHRPAPPTQARPLNLQ---------------------VLVAED 842
                 +  YL     +   +P    + R L L+                     +L  +D
Sbjct: 616  TEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLAEGSNPNGQRRPKILCVDD 675

Query: 843  NVINAAIIQEQLEALGCSVVLTSDGEQALTQWLPGRFDLVLTDVNMPVMNGYQLAEALRR 902
            N  N  +++  LE LG  V+  ++G  A+       FDLVL DV MP M+G    E +R 
Sbjct: 676  NAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRL 735

Query: 903  QDAT-----LPIIGITANAMREEGEHCTAVGMNGWMVKPLNLATL--------------- 942
             + T     LPI+ +TA+AM  E       GM+ ++ KP++   L               
Sbjct: 736  WENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKWTGLSLGTP 795

Query: 943  -RAQLEKHCKIEVPAVVD----------MPPLSPKMRELFVTTLRQDVHTTLAALDNQDA 991
             +AQ E     +   V+D             L+  M  + + +L  D     AA    D 
Sbjct: 796  QQAQAELLTNGDELKVLDPEEGLRLAAGKADLAADMLSMLLASLDTDREAIRAARAADDR 855

Query: 992  SGTAQQLHSMAGA 1004
            +G  +Q+H + GA
Sbjct: 856  NGLIEQVHRLNGA 868