Pairwise Alignments

Query, 1052 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 949 a.a., two-component system sensor histidine kinase RcsC from Escherichia coli ECRC62

 Score =  335 bits (858), Expect = 1e-95
 Identities = 224/654 (34%), Positives = 356/654 (54%), Gaps = 44/654 (6%)

Query: 320 IYVISVQRFLDYAMWPLLCLVAVALAMLGCSRAFT--RWYTVRVVLPAHQAHASIAESEA 377
           +Y + V + L+     +L L A+ L +L  +  FT  R Y  R+ +PA      + E E 
Sbjct: 300 VYSVPVDKVLERIR--MLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQ 357

Query: 378 FSRALIDTAPIGLCVIRRSDHHVLLQNQHA------LQWQDARPLYDLLKQQPHTAPGQA 431
           F+R ++ +AP+G+C++R +D   +L N+ A      L  +D + L  ++  Q        
Sbjct: 358 FNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDV- 416

Query: 432 DLESRGRHLHVAFVPTRYQSQDAWLCVVHDVTRHIEDAAALEEARQAADSASQAKSRFLA 491
            L S   +L ++FV +RY++++  +CV+ DV+  ++   +L+E  QAA+ ASQ+KS FLA
Sbjct: 417 -LTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLA 475

Query: 492 TMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLQT-IQRSSTTLFQLISDVLDVSKIEAG 550
           T+SHE+RTPLYG++G L+LL    L P+  D L T +  SS+ L ++ISD+LD SKIE+ 
Sbjct: 476 TVSHELRTPLYGIIGNLDLLQTKEL-PKGVDRLVTAMNNSSSLLLKIISDILDFSKIESE 534

Query: 551 QMTLELQDFCPLELTEDCVRTYGAFARSKGLQLYACIDANLPDRLRGDPLRIRQILNNLL 610
           Q+ +E ++F P E+       Y      K L LY  I+ ++P  L GDP+R++Q+++NLL
Sbjct: 535 QLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLL 594

Query: 611 SNAIKFTDNGRVVLRLRGLETSDGRVELQWQVSDSGVGIAQAQQHQLFDPFYQAEDATRQ 670
           SNAIKFTD G +VL +R    +DG   L  +V D+GVGI   +  +LFDPF+Q     ++
Sbjct: 595 SNAIKFTDTGCIVLHVR----ADGDY-LSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQR 649

Query: 671 --AGAGLGLAICKWLCELMHGQLNVVSEPGLGSSFTLQVALEPVPGTLADCP----VFSP 724
              G GLGLAIC+ L  +M G ++V SEPG+GS FT+++   P+ G  A  P    V   
Sbjct: 650 NFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRI---PLYG--AQYPQKKGVEGL 704

Query: 725 DTPAVYVRAPEAERTQCMIDWLKRLGLDSRVFAAD--TPAAALLVDFTHDPAWPGTRIIA 782
                ++    A   Q +   L+R G+    +     TP   L+ D      W G  ++ 
Sbjct: 705 SGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVT 764

Query: 783 ----SAGGPSPAQPYGSDW---AVDANDVRAIAWAVYLAQHGAEADHRPAPPTQARPL-- 833
                 G P    P   +W       +++ A+   +YL +  ++      P T       
Sbjct: 765 FCRRHIGIPLEKAP--GEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDN 822

Query: 834 -NLQVLVAEDNVINAAIIQEQLEALGCSVVLTSDGEQALTQWLPGRFDLVLTDVNMPVMN 892
            ++ +LV +D+ IN  ++ +QL +LG      +DG  AL        D+VL+DVNMP M+
Sbjct: 823 DDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMD 882

Query: 893 GYQLAEALRRQDATLPIIGITANAMREEGEHCTAVGMNGWMVKPLNLATLRAQL 946
           GY+L + +R+   TLP+IG+TANA+ EE + C   GM+  + KP+ L  ++  L
Sbjct: 883 GYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTL 936