Pairwise Alignments

Query, 451 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 510 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score =  184 bits (466), Expect = 7e-51
 Identities = 159/496 (32%), Positives = 217/496 (43%), Gaps = 61/496 (12%)

Query: 1   MGRLSLSGLTIWMLCSATFAQERPADFATQVPLAVSGAGPWYSLELPLAVQMSARQANLS 60
           M  L      + ++  + FAQ  P       P+A+ GAGP++ L LPL +   A  A+L 
Sbjct: 9   MRALGAGAALVAVMAGSAFAQPAPT-----APIALQGAGPYHRLTLPLTIYSRAAYADLR 63

Query: 61  DVRVFDAAGE--PQAYALSRPSAQRTESRNVTDVKWFPLYAADTEQALPDVVMKATT--T 116
           D+RV +AAG   P A+  S  +  RT SRN   V  F L   D   A  D  +  T    
Sbjct: 64  DLRVRNAAGHAVPYAWLRSEAATPRTASRN---VPIFALPGIDASAASGDAALAFTVRPD 120

Query: 117 GALVEITPSTAAKPGKQVLRGWVLDASAIKAPLQQLSLDWSHEQEGFQRFSIEASDDLQH 176
           G+L     S AA         W++D S +K  L Q   + + +  G   F +EASDDL+ 
Sbjct: 121 GSLALDGKSAAASRKTTDAAQWLIDLSQVKGSLLQARFEIAPDARGLFAFRLEASDDLRR 180

Query: 177 WQAWGD-GQVARLSFADERVEQHDVSLPGQSARYLRLVWQG-QAAPLLTSARLESSTRSN 234
           W+  GD  Q+ RL+   + +E+  V L     R+LRL W   Q    LT   ++S     
Sbjct: 181 WRPVGDEEQLVRLAHGGQTIERLAVDLGNLRTRFLRLRWSDPQHGVALTGVGIDSVQEVE 240

Query: 235 LPMPLVWSQALPGGRLKAGEYSWQLPTGLNVERLRVELKQPNTLAPVTLSG--------- 285
              PL WS AL   R  A    + LP GL V  LRV+L   NTLA V +SG         
Sbjct: 241 PVAPLEWSAALKPERCAADYCDYLLPRGLPVRSLRVDLADINTLAQVAISGLSGPAPASS 300

Query: 286 ----------------RSEVKQAWQ--------PLSNGLLYRLSQNGKEVVQDELQLPGQ 321
                           R + +Q  Q        PL + ++YRL+Q G E     L L G 
Sbjct: 301 SAVPPQPVPRNPLYALRHQQRQPVQRPALADETPLVDTVVYRLAQAGGEARSPVLALDGA 360

Query: 322 AVAQLRLQVDERGGGLGVEAPVLRVAVRATQLVFLARGEPPFTLALGNV---------SV 372
             A+LRL+       LG   P + V      LVFLA+G  PF+LA  +          + 
Sbjct: 361 VHARLRLRTSGPVSVLGATPPSIAVGAVPRTLVFLAQGAAPFSLAWRSAPEAVGTLEGAE 420

Query: 373 KGANLPLSTLIPDYRDERLKTLGQAT-----LAGEIAVKPAAIAALPDTGPDLKKLGLWA 427
            GA L LSTLIP Y  ++  +   A+     ++   AV PAA           +K  LW 
Sbjct: 421 PGAPLALSTLIPGYAADKPVSADDASVELPLMSVAAAVAPAAQVPAAPVQESSRKWWLWG 480

Query: 428 VLLLGVAALGAMAYSL 443
            L  G+  L  MA+SL
Sbjct: 481 ALGAGLLLLAGMAWSL 496