Pairwise Alignments

Query, 435 a.a., glucarate transporter from Pseudomonas simiae WCS417

Subject, 449 a.a., D-glucarate permease from Variovorax sp. SCN45

 Score =  369 bits (946), Expect = e-106
 Identities = 181/427 (42%), Positives = 263/427 (61%), Gaps = 9/427 (2%)

Query: 17  RKRFFIMVLLFITVVINYLDRSNLSIAAPALTSELGIDPVHVGLIFSAFGWTYAAMQIPG 76
           RKRF I+ L+ + +  +  DR+ LS+A   +  EL + PV +G +FS+F W Y    IP 
Sbjct: 5   RKRFLILALITVVLAFSTGDRATLSVAGSGMAKELQLSPVQMGWLFSSFAWAYVLAHIPA 64

Query: 77  GWLVDRVPPRILYTAALLLWSIATVMLG----FAASFIALFVLRMAVGALEAPAYPINSR 132
           GWLVDR+  +      L+LWSI T + G    F + F  L  LR  +G  EAP  P + R
Sbjct: 65  GWLVDRLGAKRTVVIGLVLWSICTALQGAAAWFGSVFATLIALRFLMGVFEAPVGPASGR 124

Query: 133 VVTTWFPERERATAIGVYTSGQFVGLAFLTPVLAWLQHAFGWHMVFVATGGVGIVWAVIW 192
           V+  WFP  ER  A  ++ S Q++ LA  TP++ WL H FGW  VF   GG+G++ AV+W
Sbjct: 125 VIAMWFPSGERGVAGAIFNSAQYLSLAVFTPLMGWLDHRFGWEHVFSVMGGLGLLLAVVW 184

Query: 193 YAVYREPKEFKGANTAEIDLIREGGGLVDM---QEKAAKAPFSWVDLGIVLSKRKLWGIY 249
           YA +  P      +  E+D IR GG L D+   Q    K P +   L +  S R L GI+
Sbjct: 185 YAWFHVPATHPSLSAQELDSIRAGGALTDLNARQTSVRKDPDAPGILDLFRS-RMLSGIF 243

Query: 250 LGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGIFSDWLIRR 309
           L Q+C+ +  WFF++WFPTYLVK RG   + +G +ASLP +A F+G + +G  +DWL+RR
Sbjct: 244 LAQYCITAITWFFVSWFPTYLVKERGFSILNAGFIASLPAIAGFIGGVSTGFVTDWLLRR 303

Query: 310 GASVGFARKLPIIGGLLISTAIIGANYVDSTAWVIAFLAVAFFGNGLASITWSLVSTLAP 369
             S+  ARK+PI  GLL++ ++IG N+VD+   VI  +++AFFG G  S+ W++V+  AP
Sbjct: 304 TGSLTIARKIPITIGLLLTASMIGCNFVDADWMVIGLMSLAFFGKGFGSLGWTVVADTAP 363

Query: 370 ARLLGLTGGVFNFIGNLSAIATPIVIGF-LASGDSFAPAITYIAVLALLGALSYVLLVGK 428
             L+GLTGGVFN IGN + I TP+VIG+ L + +SF  A+ ++ +  L+  +SY L+VGK
Sbjct: 364 KELIGLTGGVFNAIGNTAGITTPLVIGYILGATNSFHYALVFVGLHGLVAVMSYWLIVGK 423

Query: 429 VERIELK 435
           +ER  ++
Sbjct: 424 IERFNVR 430