Pairwise Alignments

Query, 435 a.a., glucarate transporter from Pseudomonas simiae WCS417

Subject, 452 a.a., D-glucarate permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  400 bits (1028), Expect = e-116
 Identities = 188/431 (43%), Positives = 279/431 (64%), Gaps = 11/431 (2%)

Query: 16  TRKRFFIMVLLFITVVINYLDRSNLSIAAPALTSELGIDPVHVGLIFSAFGWTYAAMQIP 75
           T  R++I+V+LFI    NY DR+ LSIA   +  ++G+DPV +G +FSAF W Y   QIP
Sbjct: 15  TNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIP 74

Query: 76  GGWLVDRVPPRILYTAALLLWSIATVMLGFAASF------IALFVLRMAVGALEAPAYPI 129
           GGWL+DR   + +Y  ++ +WS+ T++ GF   F      +ALF LR  VG  E+P++P 
Sbjct: 75  GGWLLDRFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTLRFLVGLAESPSFPG 134

Query: 130 NSRVVTTWFPERERATAIGVYTSGQFVGLAFLTPVLAWLQHAFGWHMVFVATGGVGIVWA 189
           NSR+V  WFP +ER TA+ ++ S Q+       P++ WL H  GW  VF   GG+GI+ +
Sbjct: 135 NSRIVAAWFPAQERGTAVAIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIIS 194

Query: 190 VIWYAVYREPKEFKGANTAEIDLIREGGGLVDMQEK--AAKAPFS--WVDLGIVLSKRKL 245
            IW  V  EP    G N  E++ I EGG L++M +K   AK PFS  W  +  +L  R +
Sbjct: 195 FIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSVKWGQIKQLLGSRMM 254

Query: 246 WGIYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGIFSDW 305
            G+Y+GQ+C+N+  +FF+TWFP YLV+ RGM  +K+G +AS+P +  F+G +  GI SDW
Sbjct: 255 IGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDW 314

Query: 306 LIRRGASVGFARKLPIIGGLLISTAIIGANYVDSTAWVIAFLAVAFFGNGLASITWSLVS 365
           L+RR  S+  ARK PI+ G+L+S  ++  NYV+    +I F+A+AFFG G+ ++ W++++
Sbjct: 315 LMRRTGSLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMA 374

Query: 366 TLAPARLLGLTGGVFNFIGNLSAIATPIVIGFL-ASGDSFAPAITYIAVLALLGALSYVL 424
             AP  + GL+GG+FN  GN+S I TPI IG++  +  SF  A+ Y+ V AL+  +SY++
Sbjct: 375 DTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALVAIISYLV 434

Query: 425 LVGKVERIELK 435
           LVG ++RIELK
Sbjct: 435 LVGDIKRIELK 445