Pairwise Alignments

Query, 560 a.a., monovalent cation/H+ antiporter subunit D from Pseudomonas simiae WCS417

Subject, 672 a.a., hydrogenase 4 subunit B from Escherichia coli ECRC62

 Score =  109 bits (273), Expect = 3e-28
 Identities = 135/500 (27%), Positives = 221/500 (44%), Gaps = 76/500 (15%)

Query: 6   QLIVAPILLPLLTA-ALMLMLGEKRRPLKAK--INLFSSVIGLGIAILLLYWTQKGGPGS 62
           QL+   ++L L  + A + +LG  R  +K     +L   VIG+   I  L+         
Sbjct: 5   QLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLH--------- 55

Query: 63  IGVYLPGNWQVPFGIV---LVVDQLSALMLVLTGIIGVSALLFA---MARWDRAGTSFHA 116
            GV L   +  PF      L +D LSA M+++  ++ V   L++   M  ++  G +   
Sbjct: 56  AGVTLVARFATPFDFADFTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMG 115

Query: 117 LFQIQMMGLYGAFLTAD-LFNLFVFFEVLLAASYGLMLHGSGRARVSSGLHYIAINLLAS 175
            F    +    A L  D  F   V FE++  +S+ L++    +  +++G+ Y  I    S
Sbjct: 116 FFMNLFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGS 175

Query: 176 SLFLIGAAMIYGVTGTLNFADLALKIPLVPEADRGLLHAGAAILATAFLAKAGMWPLNFW 235
            L +I   ++   +G+L+FA     + L P    GL  A   +    F AKAGM PL+ W
Sbjct: 176 VLIMIAFLLMGRESGSLDFASFRT-LSLSP----GLASAVFLLAFFGFGAKAGMMPLHSW 230

Query: 236 LAPAYSSASAPVAA-MFAIMTKVGVYTVLRLWTLLFSGQAGASALFGGDWLVYGGMATIL 294
           L  A+ +A +  +A M  +M K+G++ +L++   L + Q G    +G   +  G ++ +L
Sbjct: 231 LPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLA-QTGLPLWWGILVMAIGAISALL 289

Query: 295 CAGLAMVAAQRLERMASLSILVSAGILLSAVGFA-------QPSLTA----GALFYLVSS 343
              L  +A Q ++R+ + S + + GI+L AVG A        P LT     GALF+L++ 
Sbjct: 290 -GVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNH 348

Query: 344 TLALSALFLLAELIERSRSANDLPLDEEIDALPKAMESLHPRPGVNLDDEQKAVVGQVIP 403
            L    LFL A  I      +D+   E++ AL K M                       P
Sbjct: 349 ALFKGLLFLGAGAIISRLHTHDM---EKMGALAKRM-----------------------P 382

Query: 404 WTMAFLGLSFVACALLIIGMPPLSGFIGK---LSLLSALVNPLGLGVSIDAPIRPAAWGL 460
           WT A      + C L I  +PPL+GFI +      L +L     + + +  PI      +
Sbjct: 383 WTAA---ACLIGC-LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPI-----AM 433

Query: 461 VALLILSGLASLIAFARLGI 480
           V L +  GLA +      GI
Sbjct: 434 VMLAVTGGLAVMCFVKMYGI 453