Pairwise Alignments

Query, 309 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 316 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

 Score =  424 bits (1090), Expect = e-123
 Identities = 225/305 (73%), Positives = 252/305 (82%), Gaps = 4/305 (1%)

Query: 1   MTTPNS---PSRFNRFSKAECILVVITMIWGGTFLLVQHAMTVSGPMFFVGLRFAAAAIV 57
           M  P+S   P+   R SKAE +LV ITM+WGGTFLLV + MTVSGPMFFVGLRFAAAA+ 
Sbjct: 1   MNQPSSKPTPAVTFRLSKAELVLVFITMLWGGTFLLVHNVMTVSGPMFFVGLRFAAAALF 60

Query: 58  VGFFSLRTLRDLTLFELKAGVFIGVAIMFGYGLQTIGLQTILSSQSAFITALYVPFVPLL 117
           VG  S R L  LT  ELKAG+ IGV+IM GYGLQT+GLQTI SSQSAFITALYVPFVPLL
Sbjct: 61  VGVVSARALPGLTFTELKAGMLIGVSIMLGYGLQTMGLQTISSSQSAFITALYVPFVPLL 120

Query: 118 QWLVLGRRPGLMPSIGIMLAFTGLMLLTGPAGASLNFSPGEIATLIGAVAIAAEIILISA 177
           QWLVLGRRPGLMPS+GI LAF GLMLL GP G SL FS GE+ TLI AVAIA EIILIS 
Sbjct: 121 QWLVLGRRPGLMPSMGICLAFIGLMLLAGPEGGSLRFSEGELVTLISAVAIAGEIILISR 180

Query: 178 FAGQVDVRRVTVVQLATASLLSFLMVVPMGEALPGFSWLLLFSAVGLGLTSAVIQVAMNW 237
           +AGQVDVRRVTVVQLATASLL+FLM+VP  E +P FSWLLL SAVGLG  SAVIQVAMNW
Sbjct: 181 YAGQVDVRRVTVVQLATASLLAFLMIVPTQERIPDFSWLLLASAVGLGAMSAVIQVAMNW 240

Query: 238 AQQSVSPTRATLIYAGEPVWAGVVGRIAGERFPPIAMVGAALIVAAVIVSEMKT-KGQKA 296
           AQ+SVSPTRATLIYAGEPVWAG+VGR+AGER P +A++G  LIV AV+VSE+K  + ++ 
Sbjct: 241 AQKSVSPTRATLIYAGEPVWAGIVGRLAGERLPGVALLGGLLIVVAVVVSELKVRRPRET 300

Query: 297 LELRD 301
           +E RD
Sbjct: 301 VETRD 305