Pairwise Alignments

Query, 187 a.a., Cro/Cl family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 182 a.a., DNA-binding transcriptional repressor PuuR-putrescine from Pseudomonas putida KT2440

 Score = 42.4 bits (98), Expect = 5e-09
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 6/173 (3%)

Query: 15  VSQNVRRLRHAADLSQTALSEKSGVSRRMLVAIEAGEKNVSLSTLDRVAEALD---VAFS 71
           V + ++ +R    LSQ  L++++GV+   +  IE    + S+S+L +V   +    V F 
Sbjct: 3   VGERLQAIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLSGIPMSMVEFF 62

Query: 72  DLIQAPDAPDHSRINELAWAGEIPGSKAV-LLAKATARREVELWEMQLEPG-DRYSPDPD 129
            +   P +P               G+  + L+ K+   R +        PG D  +    
Sbjct: 63  SVELEPQSPTQIVYKAHELIDISDGAVTMKLVGKSHPNRAIAFLTEVYPPGADTGAEMLT 122

Query: 130 PDGWSVQLFVFDGCLTLLVGDEEKRVAAGEFYMFASRHVHGYRNDGDVAVRFV 182
            DG    + + +G L L+VG+E   +  G+ Y F S   H +RN  D   R +
Sbjct: 123 HDGEETGI-LLEGRLELVVGNEIFVLEEGDSYYFESTRPHRFRNPFDQPARLI 174