Pairwise Alignments

Query, 398 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 95/375 (25%), Positives = 156/375 (41%), Gaps = 27/375 (7%)

Query: 11  IIRSDAEAIEVATR--LAARFAVDASARDRERRLPVAELDEFSASGLWGITIPKEYGGAG 68
           ++ +D EAI  A R    A    +A   DRE   P       +A G +GI +P+E+GGAG
Sbjct: 2   LLNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAG 61

Query: 69  VSYVTVAEVIKLISAADPSLG-QIPQNHLGVVDILLQTATEAQKQHYFGKVLQGYRFGNA 127
           + Y+T+A V++ I+A D      I   +  V  IL++     QK+ +   + QG   G A
Sbjct: 62  LDYLTLALVLEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKKQWLEPLAQGKMLG-A 120

Query: 128 F---SEAKSKNAGTFDTQIRFHGETAQINGEKFYCTGALFAHIVPTVGNNEHGQAFIG-- 182
           F         +A +  T  R  G+   I+G K + T      +   +   + G    G  
Sbjct: 121 FCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMS 180

Query: 183 --FVERDAPGLTVIDNWDGFGQRTTASGGVTLDGVTVPLSAVVPAHLAFDQPTADGPI-- 238
              V  DAPG  V    D  GQ ++ +  +  DG  +P+  ++ A        A G +  
Sbjct: 181 AFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAE-GEGYKIALGALEG 239

Query: 239 SQIIQAAVDTGIALGALEQAKIFARQARPWIDSQQDHGWQDPFTIAAIGDLEWRVHGTEA 298
            +I  AA   G+A  A + A  +A++ + +  S  D          A+G   +R+     
Sbjct: 240 GRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQ--------QAVG---FRLAECAT 288

Query: 299 ILAKAGQAVDRALAEPSEDSVAHASLVVAQAKVLSAETALLASSKLFELAGTRSVTGKHN 358
            L  A Q +  A A    D+        A AK+ ++E A    S   +  G         
Sbjct: 289 QLEAARQLIWHAAA--LRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFP 346

Query: 359 LDRFWRNARTHTLHD 373
           L+R +R+ R   +++
Sbjct: 347 LERIYRDVRVCQIYE 361