Pairwise Alignments

Query, 257 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 261 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  209 bits (531), Expect = 6e-59
 Identities = 111/250 (44%), Positives = 163/250 (65%), Gaps = 1/250 (0%)

Query: 4   AILQVRDISLSFKGIKAINALSFEVARGEICALIGPNGAGKSSLLNVLNGVYRFDAGEIV 63
           ++LQV  + +SF G+ A+N +SF +  G+I ++IGPNGAGK++L N+++GVY   +G + 
Sbjct: 2   SLLQVEGLGISFGGVTAVNDVSFGLETGKIVSVIGPNGAGKTTLFNMISGVYLPKSGRVR 61

Query: 64  FEDQHFHRIDPLGAARRGIGRTFQNNALFKKMSVLDNILTGLSRHMRSSVIEQALGLPRA 123
            + +    + P   A RG+ RTFQN  +F +MSVL+N++ G   H R  V+    GLP +
Sbjct: 62  LDGEDVTGLRPDLLAVRGMSRTFQNLQIFHEMSVLENVIVGFHMHERGPVLADLFGLPGS 121

Query: 124 RREAEAFRLRAQGILEFLELQAHRDVLVGNLSYGLQKRVELGRALIAGPSLLLLDEPMAG 183
           RR A A    A+ +LE + L+   +   G LSYG  KR+E+ RAL A P +LLLDEP AG
Sbjct: 122 RRRARAAAEGARVLLERVGLERAAEREAGALSYGALKRLEIARALAARPRVLLLDEPAAG 181

Query: 184 MNAEEKQEMARFVADVNRDLGTTVVLIEHDMGVVMGLSDHVVVLDYGRKVGDGTPADVQA 243
            NA E +E+ R + +V +  G  ++L+EHDM +VM LSD +VVLD+G K+ +G PA V  
Sbjct: 182 CNAVETEEIDRLICEVAK-TGVAILLVEHDMKLVMRLSDTIVVLDHGEKIAEGDPALVSR 240

Query: 244 NPEVIAAYLG 253
           +P+VI AYLG
Sbjct: 241 DPKVIEAYLG 250