Pairwise Alignments

Query, 257 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 648 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  197 bits (502), Expect = 4e-55
 Identities = 108/252 (42%), Positives = 155/252 (61%), Gaps = 1/252 (0%)

Query: 2   SQAILQVRDISLSFKGIKAINALSFEVARGEICALIGPNGAGKSSLLNVLNGVYRFDAGE 61
           ++ +L+   + + F G+KA+N +   + RG I  LIGPNG+GKS+++NVL G+Y   AG 
Sbjct: 395 TEDVLEASGVLMQFGGLKALNNVDLRIKRGTIHGLIGPNGSGKSTMMNVLTGIYVPTAGA 454

Query: 62  IVFEDQHFHRIDPLGAARRGIGRTFQNNALFKKMSVLDNILTGLSRHMRSSVIEQALGLP 121
           I F  +          A  GI RTFQN  LF +M+ L N+  GL     S++++ A G P
Sbjct: 455 ISFGGRSLVGRTSADIALSGIARTFQNVQLFGEMTALQNVQVGLHHSFASNLLDVAAGTP 514

Query: 122 RARREAEAFRLRAQGILEFLELQAHRDVLVGNLSYGLQKRVELGRALIAGPSLLLLDEPM 181
           R RRE+ A   R  G+L+F+ L++       NL YG Q+ +E+ RAL   P LLLLDEP 
Sbjct: 515 RYRRESAAAVQRGLGLLKFVGLESFATEEARNLPYGKQRLLEIARALALDPQLLLLDEPA 574

Query: 182 AGMNAEEKQEMARFVADVNRDLGTTVVLIEHDMGVVMGLSDHVVVLDYGRKVGDGTPADV 241
           AG+ A + +E+   +  + R+ G TV+LIEH M VVM + D V VLD+G+K+ +G PA V
Sbjct: 575 AGLTAPDIKELLGIIRKI-REHGVTVILIEHHMDVVMSMCDTVSVLDFGQKIAEGEPARV 633

Query: 242 QANPEVIAAYLG 253
           QA+ +VI AYLG
Sbjct: 634 QADEKVIEAYLG 645