Pairwise Alignments

Query, 257 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 2e-51
 Identities = 110/280 (39%), Positives = 161/280 (57%), Gaps = 32/280 (11%)

Query: 5   ILQVRDISLSFKGIKAINALSFEVARGEICALIGPNGAGKSSLLNVLNGVYRFDAG--EI 62
           IL V ++ + F GIKA++ +S +V R +I ALIGPNGAGK+++ N L G Y+   G  E+
Sbjct: 6   ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65

Query: 63  VFEDQHFHRIDPLGAA----------------------------RRGIGRTFQNNALFKK 94
                H + I  LG                              R G+ RTFQN  LFK+
Sbjct: 66  NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFKE 125

Query: 95  MSVLDNILTGLSRHMRSSVIEQALGLPRARREAEAFRL-RAQGILEFLELQAHRDVLVGN 153
           MSV++N+L      +  +++   L   +A R+AE+  L  A   LE ++L    + L G 
Sbjct: 126 MSVVENLLVAQHMWVNRNLLAGVLNT-KAYRKAESDALDHAFYWLEVVDLVDCANRLAGE 184

Query: 154 LSYGLQKRVELGRALIAGPSLLLLDEPMAGMNAEEKQEMARFVADVNRDLGTTVVLIEHD 213
           LSYG Q+R+E+ RA+   P ++ LDEP AG+N +E + ++R +  +  +   TVVLIEHD
Sbjct: 185 LSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIEHD 244

Query: 214 MGVVMGLSDHVVVLDYGRKVGDGTPADVQANPEVIAAYLG 253
           MG+VM +SDH+VVLD+G  + +G P D++ NP VIAAYLG
Sbjct: 245 MGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284