Pairwise Alignments

Query, 257 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  195 bits (495), Expect = 1e-54
 Identities = 112/259 (43%), Positives = 158/259 (61%), Gaps = 10/259 (3%)

Query: 5   ILQVRDISLSFKGIKAINALSFEVARGEICALIGPNGAGKSSLLNVLNGVYRFDAGEIVF 64
           IL+V  +S+ F G+ AIN  SFE  RGEI ALIGPNGAGK+++ N + G Y+   G I  
Sbjct: 21  ILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM 80

Query: 65  EDQH-----FHRIDPLGAARRG-IGRTFQNNALFKKMSVLDNILTGLSRHMRSS---VIE 115
             Q+       R+      ++  + RTFQN  LF  ++VL+N+L      +  +    I 
Sbjct: 81  RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 140

Query: 116 QALGLPRARREAEAFRLRAQGILEFLELQAHRDVLVGNLSYGLQKRVELGRALIAGPSLL 175
             LGLP  +R   +   +A+  LE  +L    D   G+L YG Q+R+E+ RA+  GP LL
Sbjct: 141 GLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 200

Query: 176 LLDEPMAGMNAEEKQEMARFVADVNRDLGTTVVLIEHDMGVVMGLSDHVVVLDYGRKVGD 235
            LDEP AG+N +E   +   +  + RD GT+++LIEHDM VVM +SDHVVVL+YG+K+ D
Sbjct: 201 CLDEPAAGLNPKESLALNTLLRSI-RDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKISD 259

Query: 236 GTPADVQANPEVIAAYLGV 254
           G+P  V+ +P+VIAAYLGV
Sbjct: 260 GSPDHVKNDPKVIAAYLGV 278