Pairwise Alignments

Query, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 421 a.a., putative ABC efflux transporter, permease protein from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 38/294 (12%)

Query: 140 LALQQGRFLSGFDANETYGVI-GDQVAQSLGAP-GDPLRLG------DRVRINDYLFLIV 191
           L L QGR      AN+ + V+ G +VA++L    GD L L         V+ +D  F +V
Sbjct: 131 LQLSQGREF----ANDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDDKPFTVV 186

Query: 192 GILRSQ----PRAMLMPVQANESLFI------PAEGMRRIYATPQIGNLIIRAAPGQDME 241
           G+L+       R + + +   E++ I      PA G  RI A       +  AA    M 
Sbjct: 187 GVLKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGAGRISAEQARTMDLQPAAITAFML 246

Query: 242 RIAKNVAV-ALQPQLTDHDVD---IQVPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVG 297
            +   +A  +LQ ++ ++  +     +P   +  +     T    L  +    ++ G +G
Sbjct: 247 GLNSKIATFSLQREINEYRSEPLLAILPGVALQELWSLMGTAEQALFVVSLFVVLTGLIG 306

Query: 298 VMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGLTAAWLYA 357
           ++  +L +++ERRRE+ I  ++GAR   I  L +LEA++L +VG + G  LGL  A + A
Sbjct: 307 MLTAILTSLNERRREMAILRSVGARPWHIAGLLVLEALSLASVGIVAG--LGLLYAGI-A 363

Query: 358 WLSGWEFALAIAALPLGVGST---------LLVGLFFGIYPAVSASRLQPVEAL 402
              G+  A     LPL + ST         L   L  G  PA  A R    + L
Sbjct: 364 LAQGYVQANYGLYLPLALPSTHEWTLLAIILGAALLMGSVPAWRAYRQSLADGL 417