Pairwise Alignments

Query, 352 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 655 a.a., p-hydroxybenzoic acid efflux pump subunit AaeB from Escherichia coli ECOR38

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 19/124 (15%)

Query: 29  AVRVSIGLLATILLTTGINLPHGEWASVTMLVVI-------GGLQHHGNIGKKAVERAYG 81
           AV+++  ++  + +     L    WA +T  +V        GG  + G I  +   R  G
Sbjct: 14  AVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGFLRIIG 73

Query: 82  TLIGASVGLLLVVQEAYVGQPLLTYLLMSVVCGFFSY----------HAIGKGGYTALLS 131
           T IG   GL++++  A +  PLL  L+  +  GF ++          +A G  GYTAL+ 
Sbjct: 74  TFIGCIAGLVIII--AMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALII 131

Query: 132 AITV 135
            IT+
Sbjct: 132 VITI 135



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 15/230 (6%)

Query: 22  RHAKLIHAVRVSIGLLATILLTTGINLPHGEWASVTMLVVIGGLQHHGNIGKKAVERAYG 81
           RH  +++  R ++  +   L         G  A V + VV        N    A++  YG
Sbjct: 351 RHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFIYG 410

Query: 82  TLIGASVGLL-LVVQEAYVGQPLLTYLLMSVVCGFFSYHAIGK---GGYTALLSAITVFI 137
           TL    +GLL  +V      Q +L   +   V GFF    + K   G   AL S I + +
Sbjct: 411 TLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIV 470

Query: 138 VAGHGDNPLSDGLWRTVDILIGIALALAFSFALPLYAVYSWRYNLASALRDCAQIYSRII 197
           +    DNP++    + +D  +G  +    +F + L      R      L +  Q  S  +
Sbjct: 471 L----DNPMTFHFNQFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLN--QFVSAAV 524

Query: 198 NGESVTSDEHLKLLNRLNAAMLQLRSLM---PSVSKEVRISMTELDAIQR 244
           +  ++T++   +  N L A   QL  LM   P    + R+++T + A QR
Sbjct: 525 S--AMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTMIIAHQR 572