Pairwise Alignments

Query, 487 a.a., NADH:ubiquinone oxidoreductase subunit N from Pseudomonas simiae WCS417

Subject, 495 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  228 bits (582), Expect = 3e-64
 Identities = 141/404 (34%), Positives = 218/404 (53%), Gaps = 24/404 (5%)

Query: 99  GTGYPGNRE-----ELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFN 153
           G  Y  +RE     EL+ + + A  G  V++S  +   +++GLELL++ +Y LVA    N
Sbjct: 94  GRPYAADREMLRGGELFTVSMFALLGMFVMISGSNFLLIYLGLELLTLSSYALVALRRDN 153

Query: 154 KRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGNLSFTGIGHALAATSMPAPVAQLGLAM 213
             + EA +KY VL A  S FLL+G++++Y   G+L    +   +A+  +   V   GL  
Sbjct: 154 AVASEAAMKYFVLGAMASGFLLYGLSMMYGATGSLDVNEVFKTIASGKVNHQVLVFGLVF 213

Query: 214 MLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVL 273
           ++ GLAFK+   PFH+W PDVY+GAP  +   +  A ++A FA+++RL   +        
Sbjct: 214 IVAGLAFKVGAAPFHMWVPDVYQGAPTAITLLIGAAPELAAFAIIIRLLVDALQPLAIDW 273

Query: 274 STVLTVIAIASILFGNLLALTQNNLKRLLGYSSIAHFGYLLIALVASKG--------LAV 325
             +L V+AIAS+L GNL A+ Q+NLKR+L YS+I+  G++L+ LVA            A 
Sbjct: 274 QQMLAVLAIASLLVGNLAAIAQSNLKRMLAYSTISQMGFMLLGLVAGSDQQGTYNAQYAY 333

Query: 326 EAMGVYLVTYVITSLGAFGVITLMSSPFKGRDADALYEYRGLFWRRPYLTAVLTVMMLSL 385
            A   Y+VTYV+T+L +FG+I L++   +G +++ + +  GL  R P    V+ + M SL
Sbjct: 334 SASMFYIVTYVLTTLASFGIILLLAR--EGFESEEITDLAGLNQRSPLYAGVMAIAMFSL 391

Query: 386 AGIPLTAGFIGKFYI----VATGVEAHEWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNL 441
           AG+P   GF  K  +    +A+G  A    L    V+ S IG FYYLRV+  +Y   P  
Sbjct: 392 AGLPPLVGFYAKLAVLQALIASG-HAIYIGLAVFAVMMSLIGAFYYLRVVKVMYFDAP-- 448

Query: 442 RRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVL 485
             V A      +    +L     L   LG+ P  L+TL   A++
Sbjct: 449 --VTATTVSAPRDVRAVLTINGALILILGIVPGGLMTLCYDAIV 490