Pairwise Alignments

Query, 487 a.a., NADH:ubiquinone oxidoreductase subunit N from Pseudomonas simiae WCS417

Subject, 478 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score =  258 bits (659), Expect = 3e-73
 Identities = 175/475 (36%), Positives = 257/475 (54%), Gaps = 22/475 (4%)

Query: 9   IALAPLLITSLTIVVVMLAIAW---RRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTP 65
           +A+ P LI + + +V+ML  A+   R  H+  +L   A L  A LS+  ++   P+A   
Sbjct: 8   LAVLPELILTGSGLVLMLIAAFGGDRSTHAVNWLAVLA-LLAAGLSLCTSMAHGPVAFDG 66

Query: 66  LMMVDDFALLYIALILVATLACVTLAHAYLGEGGTGYPGNREELYLLILLAAAGGIVLVS 125
           L+  D F++   ALI  A  A + LA  +   GG   P    E  +LI+ AA G  ++VS
Sbjct: 67  LVRADAFSVYAKALIYGAAGAAILLAPRFFATGGALRP----EYAVLIVFAAIGMGMMVS 122

Query: 126 AQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEA 185
           A  +  L++GLE+ S+ +Y L ++   +++S EAG+KY VL +  S  LL+G++LLY   
Sbjct: 123 AGDMLTLYVGLEMNSLASYVLASFMRQDEKSSEAGLKYFVLGSLASGILLYGISLLYGFT 182

Query: 186 GNLSFTGIGHALAATSMPAPVAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAF 245
           G+ +F GI  A+A     +     GL  +L GLAFK+S VPFH+WTPDVYEGAP PV AF
Sbjct: 183 GSTAFDGI--AIAMGDGVSKGELFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPVTAF 240

Query: 246 LATASKVAVFAVMVRLFQISPAANTGV-LSTVLTVIAIASILFGNLLALTQNNLKRLLGY 304
             +A KVA   +MVR+  I      G+    ++  +A+ASILFG + A+ Q ++KRL+ Y
Sbjct: 241 FGSAPKVAAMGLMVRV-AIEALGPAGLDWQQIIIFVALASILFGAVAAIGQTSIKRLMAY 299

Query: 305 SSIAHFGYLLIALVASKGLAVEAMGVYLVTYVITSLGAFGVITLMSSPFKGRDADALYEY 364
           SSI + G+ L+ L A     V A   Y+  YV+ ++GAF  I  M     G+  D +   
Sbjct: 300 SSINNVGFALVGLAAGTPAGVAATMSYMAIYVVMTIGAFACILQMRDA-DGKPVDTIASL 358

Query: 365 RGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIVATGVEAHEWWLVASLVLGSAIGV 424
            GL   R  L+A   + M S+AGIP   GF  KF +    V A+   L A  +  S IG 
Sbjct: 359 AGLSQSRKGLSAAFAIFMFSMAGIPPLFGFWAKFLVFDAAVAANLTALAAFGIAMSVIGA 418

Query: 425 FYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGV--MLLAIALLAFFLGVYPQPLL 477
           FYYL+++ T+Y  EP          +E K G V  +++A   +    G    PLL
Sbjct: 419 FYYLKIIKTIYFDEP-------AAPYEAKGGAVENIIMAACAIVIVFGYLLNPLL 466