Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 723 a.a., NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  217 bits (552), Expect = 2e-60
 Identities = 181/655 (27%), Positives = 305/655 (46%), Gaps = 59/655 (9%)

Query: 1   MATIHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTR 60
           M  I +DGK +EV     ++ A    G  IP+FC+H  L     CR C V     + +  
Sbjct: 1   MIEIELDGKKVEVTEGSMVMHAADKAGTYIPHFCYHKKLSIAANCRMCLV-----DVEKA 55

Query: 61  GRIVMSCMTPATDNTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVM 120
            + + +C TP T    +    E++   + SV+E+L+ NHP DCP+C++GG C LQD+ V 
Sbjct: 56  PKPMPACATPVTQGMIVRTKSEKAIKAQQSVMEFLLINHPLDCPICDQGGECQLQDLAVG 115

Query: 121 TGHNERRYRFTKRTHQNQDLGPFIS-HEMNRCIACYRCVRFYKDYAGGTDLGVFGAHDNV 179
            G +  RY   KR   ++D+GP IS  EM+RCI C RCVRF ++ AG  +LG+    ++ 
Sbjct: 116 YGGSSSRYEEEKRVVFHKDVGPLISMEEMSRCIHCTRCVRFGQEVAGVMELGMSHRGEHS 175

Query: 180 YFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYN-RKWDMQFAPSICHGCSSGCNIS 238
                    ++SE SGN+ ++CP G  T K    RY+ R W++    S+    S+G N+ 
Sbjct: 176 EIETFVGDSVDSELSGNMIDICPVGALTSKPF--RYSARTWELSRRKSVSPHDSTGANLI 233

Query: 239 PGERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNREDRPRQPLLAGGA---KLSTDEA 295
              +   + R+    N  VN+ ++ DR RF Y  +N  +R  QP+L  G    ++    A
Sbjct: 234 VQVKNNHVMRVVPLENEDVNECWIADRDRFSYEALNGTERLTQPMLKQGGQWQQVDWQTA 293

Query: 296 LDKAAELLR-------GRNIVGIGSPRASLE----SNFALRELVGAEHFYSGIEAGELER 344
           L+  A  L+        ++I  + SP ++LE    +    REL G+++    +   E   
Sbjct: 294 LEYVANGLKQIKADHGAQSIGTLVSPHSTLEELQLATMLTREL-GSDNIDYRLRNAEFAA 352

Query: 345 IRLVLQVLNDSPLPVPNMRDIEDHDAIFVLGEDLTQTAARIALSLRQSV-KGKAEDMADA 403
              V  +         ++  +       V+G +L +     A  +RQ+V KG A  +  +
Sbjct: 353 FEGVRWL-------GTSIASLTQVQRALVVGSNLRKEHPLFAQRIRQAVRKGAALSVITS 405

Query: 404 MRVQPWLDAAVKNIGQHALNPLFIASLAETKLDDIAEECVHAAPDDLARIGFAVAHALDA 463
             +    +A   ++ Q        +S+ E      A++ V A    LA +  A+     A
Sbjct: 406 ASLMADRNAWAIDVAQ--------SSIVE------ADQWVEA----LAAVAAAIGETNGA 447

Query: 464 SAPAVEGLDTEAVELAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKALKLRDKNG 523
           +AP       +A   A+ IA +LL+ +R  ++ G +    A  +A++ +A A  +  + G
Sbjct: 448 AAPLAPKNAPDAA--AKAIAASLLSGERKAVLLGNAAAHHA--QASSLLALANWIGAQTG 503

Query: 524 -SISLVVPEANSLGLAMLG----GESLDAALQAVIDGKADAIVVLENDLYTRTDAAKVDA 578
            ++  +   AN++G  ++G       LDA           A+++L N+    + A K  A
Sbjct: 504 ATVGYLTEAANTVGAQLVGAFPKNGGLDAGRMLAAGSGLKAVLLLNNEPVFDSAAGKAAA 563

Query: 579 ALDAAKVLIVADHQKTATSDRAHLVLPAATFAEGDGTLVSQEGRAQRFFQVFDPK 633
            +     ++V      A  + + ++LP A F E  GT V+ EGR Q F  V  P+
Sbjct: 564 DVIGNAQMVVTLSPFKANLEFSDVLLPIAPFTETPGTFVNAEGRLQGFHAVVKPQ 618