Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 668 a.a., NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score =  204 bits (518), Expect = 2e-56
 Identities = 184/689 (26%), Positives = 281/689 (40%), Gaps = 92/689 (13%)

Query: 1   MATIHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTR 60
           M  + VDG  LEV     +LQAC   G +IP FC+H  L   G CR C V+        +
Sbjct: 1   MPKVKVDGVELEVPAGATVLQACEQAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQ 60

Query: 61  GRIVMSCMTPATDNTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVM 120
                SC  PAT+   I  D E  K  R  V+E+L+ NHP DCP+C++GG C LQD +V 
Sbjct: 61  A----SCALPATEGQEIRTDSEMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQSVA 116

Query: 121 TGHNERRYRFTKRTHQNQDLGPFISHEMNRCIACYRCVRFYKDYAGGTDLGVFGAHDNVY 180
            G    RY   KR    +++GP +   M RCI C RCVRF ++ AG  ++G     +N+ 
Sbjct: 117 YGRGSSRYDENKRAVTEKNMGPIVKTVMTRCIQCTRCVRFAEEVAGVPEIGAIYRGENMQ 176

Query: 181 FGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQFAPSICHGCSSGCNISPG 240
                +   +SE SGN+ ++CP G  T K ++    R W+++   +I    + G NI   
Sbjct: 177 ITTYLEHAAKSELSGNVVDLCPVGALTAKPYAFE-ARPWELKKTHAIDVMDALGTNIRLD 235

Query: 241 ERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNREDRPRQPLLAGGAKL---STDEALD 297
            R  ++ R   R N  VN+ +  D+ R     + R+ R  +P +    KL   +  EA  
Sbjct: 236 SRGRQVMRAVPRINDDVNEEWASDKTRHNVDGLVRK-RLDKPFVRKDGKLVPATWAEAFA 294

Query: 298 KAAELLRGRNIVGIGSPRASLESNFALRELVG--AEHFYSGIEAGELERIRLVLQVLNDS 355
             A +  G ++  I       E+ FA + LV         G + G    +  +  V+ ++
Sbjct: 295 AVAAVQHGGSVAAIAGDLLDCETMFAGKALVEKLGGSLLEGRQTGLSYDVSSLSSVVFNT 354

Query: 356 PLPVPNMRDIEDHDAIFVLGEDLTQTAARIALSLRQSVKGKAEDMADAMRVQPWLDAAVK 415
           PL      D+E  D I ++G +L   A  +   +R+++K  A+  A    V P  D   K
Sbjct: 355 PL-----ADLETADVILLVGTNLRWEAPLVNTRIRKAIKKGAKVFA----VGPEFDLTYK 405

Query: 416 NIGQHALNPLFIASLAETKLDDIAEECVHAAPDDLARIGFAVAHALDASAPAVEGLDTEA 475
                                                               VE L  +A
Sbjct: 406 ----------------------------------------------------VEWLGNDA 413

Query: 476 ---VELAQRIADALLAAKRPLIIAGTSLGSK--ALIEAAANIAKALKLRDKNGSISLVVP 530
               +L   + +A   A RP +I G  + +K  A  +  A +     ++D     +++  
Sbjct: 414 SLLAKLPDAVLEAFKGAARPAMIVGGGVLAKDGAHGDTLALVETLGLIKDGWNGYNVLHF 473

Query: 531 EANSLGLAMLGGESLDAALQAVIDGKADAIVVLENDLYTRTDAAKVDAALDAAKVLIVAD 590
            A  +G  MLG             G   A+      L     A +VD +       +   
Sbjct: 474 AAARMGGLMLG---------YATKGGIKAVAAAAPKLLFSLGADEVDYSAFEGSFKVYVG 524

Query: 591 HQKTATSDRAHLVLPAATFAEGDGTLVSQEGRAQRFFQVFDPKYMDASILVHEGWRWLHA 650
           H     +  A ++LP A++AE  GT V+ EGR Q     F  K + A     E W  L A
Sbjct: 525 HHGDKGAHAADVILPGASYAEKAGTYVNLEGRVQ-----FGEKAVFAPGDAREDWSILRA 579

Query: 651 LRSTLLNQPIDWTQLDHVTAAAAASAPQL 679
           L S  L   + +   D + A    + P L
Sbjct: 580 L-SEALGAKLPFDSFDALRAEMVKAVPAL 607