Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 960 a.a., formate dehydrogenase alpha subunit from Agrobacterium fabrum C58

 Score =  134 bits (337), Expect = 3e-35
 Identities = 101/363 (27%), Positives = 153/363 (42%), Gaps = 44/363 (12%)

Query: 1   MATIHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTR 60
           M T+ +DG+ + V    ++++A    G+D+P  C    + + G+CR C +     E + R
Sbjct: 19  MVTLTIDGRQVTVPTGTSIMRASREAGIDVPKLCATDMVDAFGSCRLCLI-----EVEGR 73

Query: 61  GRIVMSCMTPATDNTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVM 120
                SC TP      +    E  K  R  V+E  +++HP DC  C   G C LQDM   
Sbjct: 74  NGTPASCTTPVAAGLVVHTQTERLKQIRKGVMELYISDHPLDCLTCAANGDCELQDMAGA 133

Query: 121 TGHNERRYRFTKRTHQNQDLG---------------PFISHEMNRCIACYRCVRFYKDYA 165
            G  + RY +    H     G               P+ +++ ++CI C RCVR  ++  
Sbjct: 134 VGLRDVRYGYEGDNHVKSRTGGGDINARWMPKDESNPYFTYDPSKCIVCSRCVRACEEVQ 193

Query: 166 GGTDLGVFGAHDNVYFGRVEDGVLESEFS------GNLTEVCPTGVFTDKTHSERYNRKW 219
           G   L + G     +  RV  G  E+         G   + CPT   T+K+  E    + 
Sbjct: 194 GTFALTIEG---RGFESRVSPGAHEAFLDSDCVSCGACVQACPTATLTEKSVIEIGQPEH 250

Query: 220 DMQFAPSICHGCSSGCNISPGERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNREDRP 279
            M    + C  C  GC+     R  EL R+    +G  N+   C +GRF YGY    DR 
Sbjct: 251 SM---VTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYATHRDRI 307

Query: 280 RQPLLAGG-----AKLSTDEALDKAAELLR------GR-NIVGIGSPRASLESNFALREL 327
             P++         ++S D A    A   R      GR +I GI S R + E  F +++L
Sbjct: 308 LNPMIRENIGDPWREVSWDAAFAYVASEFRRIQGKYGRESIGGITSSRCTNEETFLVQKL 367

Query: 328 VGA 330
           V A
Sbjct: 368 VRA 370



 Score = 51.2 bits (121), Expect = 3e-10
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 549 LQAVIDGKADAIVVLEND-LYTRTDAAKVDAALDAAKVLIVADHQKTATSDRAHLVLPAA 607
           L A +DG    I +   D L +  D   V A L A + ++V D     T++ AH+ LP +
Sbjct: 638 LDAAVDGSFKGIYIQGEDILQSDPDTKHVSAGLAAMECVVVHDLFLNETANYAHVFLPGS 697

Query: 608 TFAEGDGTLVSQEGRAQRFFQVFDPK 633
           TF E DGT  + E R  R  +V  PK
Sbjct: 698 TFLEKDGTFTNAERRINRVRKVMSPK 723