Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 693 a.a., NADH ubiquinone oxidoreductase chain G from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 3e-51
 Identities = 188/718 (26%), Positives = 290/718 (40%), Gaps = 95/718 (13%)

Query: 1   MATIHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTR 60
           MA + VDGK +EV     LLQAC   G ++P FC+H  L   G CR C ++         
Sbjct: 1   MAKLKVDGKEIEVPDHFTLLQACEEAGAEVPRFCFHERLSVAGNCRMCLIEVKGGPPKPA 60

Query: 61  GRIVMSCMT----PATDNTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQD 116
               M        P  +   +  +    K  R  V+E+L+ NHP DCP+C++GG C LQD
Sbjct: 61  ASCAMGVRDVRGGPNGELPEVFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQD 120

Query: 117 MTVMTGHNERRYRFTKRTHQNQDLGPFISHEMNRCIACYRCVRFYKDYAGGTDLGVFGAH 176
             +  G    RY   KR  +++ +GP +   MNRCI C RCVRF  + AG  +LG+ G  
Sbjct: 121 QAMAFGIAGSRYAENKRAVEDKYIGPLVKTVMNRCIHCTRCVRFTTEVAGIAELGLIGRG 180

Query: 177 DNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQFAPSICHGCSSGCN 236
           ++       +  + SE  GN+ ++CP G  T K  +    R W++    +I    + G  
Sbjct: 181 EDAEITTYLEQAMTSELQGNVVDLCPVGALTSKPFAFT-ARPWELNKTETIDVMDALGSA 239

Query: 237 ISPGERYGELRRIENRFNGSVNQYFLCDRGRFGYG--YVNREDRP-------RQPLLAGG 287
           I    R  E+ R+  R N ++N+ ++ D+ RF +      R DRP        QP   G 
Sbjct: 240 IRVDTRGREVMRVMPRVNEAINEEWISDKSRFIWDGLKTQRLDRPYVRKDGRLQPATWGE 299

Query: 288 AKLSTDEALDKAAELLRGRNIVGIGSPRASLESNFALREL---VGAEHFYSGIEAGELE- 343
           A      A+ +A     G  I  I    +S+E  FAL+ L   +G+ +     +   L+ 
Sbjct: 300 A----FGAIKQAVAATSGSKIGAIAGDLSSVEEMFALKSLLASLGSANVDCRQDGAALDP 355

Query: 344 RIRLVLQVLNDSPLPVPNMRDIEDHDAIFVLGEDLTQTAARIALSLRQSVKGKAEDMADA 403
            +     + N +      +  IE  DA+ ++G +    AA +   +R+            
Sbjct: 356 SLGRASYIFNST------IEGIEHADALLIVGSNPRFEAAVLNARIRK-----------R 398

Query: 404 MRVQPWLDAAVKNIGQHALNPLFIASLAETKLDDIAEECVHAAPDDLARIGFAVAHALDA 463
            R   +    +   G+   N  ++ S AET L D+A                        
Sbjct: 399 WRRGGFPIGVIGEAGELRYNYEYLGSGAET-LSDLANG---------------------- 435

Query: 464 SAPAVEGLDTEAVELAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKALKLRDKNG 523
                          +    D L +AK PLII G   G+ A  + AA +A A KL     
Sbjct: 436 ---------------SHSFIDKLKSAKNPLIIIGQ--GALARADGAAVLAAAAKLA---V 475

Query: 524 SISLVVPEANSLGL-----AMLGGESLDAALQAVIDGKADAIVVLENDLYTRTDAAKVDA 578
           S+  V  E N   +     A +GG  LD          A A +V   D+     A ++D 
Sbjct: 476 SVGAVTEEWNGFSVLHTAAARVGG--LDIGFVPGEGAVAAAEMVTSMDVLFLLGADEIDL 533

Query: 579 ALDAAKVLIVADHQKTATSDRAHLVLPAATFAEGDGTLVSQEGRAQRFFQVFDPKYMDAS 638
           +   AK  +         +  A ++LP A + E  G  V+ EGR Q        +   A 
Sbjct: 534 SNKGAKFTVYIGSHGDQGAMNADVILPGAAYTEKSGIWVNTEGRVQ-----VGNRAGFAP 588

Query: 639 ILVHEGWRWLHALRSTLLNQPIDWTQLDHVTAAAAASAPQLARIVDAAPSAAFRIKGM 696
               E W  L AL S +L + + +  L  +      + P LA   +     A  I+ +
Sbjct: 589 GEAREDWAILRAL-SDVLGKKLPFDSLSALRGQLYVAHPHLAETDEIVAGKATDIEAL 645