Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  312 bits (799), Expect = 2e-89
 Identities = 183/471 (38%), Positives = 276/471 (58%), Gaps = 17/471 (3%)

Query: 4   SETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGV--MSRLARQQPDVIISDIRMPGA 61
           +  + +VDD+  +  +L  AL Q  +  Q F + +G+  +  L ++  D++ISD RMPG 
Sbjct: 2   THNILVVDDEPKLCDLLASALGQNDV--QVFIAGNGLHALKVLEQEDIDLVISDWRMPGM 59

Query: 62  SGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQ 121
            G  LLA I+ ++P +PVI+MTA+S + +AV S + GA++Y+ KPFD+DE    V +A Q
Sbjct: 60  DGPALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQ 119

Query: 122 HAQEQQNQEAPPAL----TRTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKEL 177
                ++     A      +   ++G++PA ++V +A+  +  S+ T+L+ GESGTGKE+
Sbjct: 120 FRDIMRDNARLRAELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEM 179

Query: 178 VAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTL 237
           VA A+H+H  RA  PF+A+N AAIP+ L+ESE+FGH KGAFTGA   R GRF+QAD GTL
Sbjct: 180 VARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTL 239

Query: 238 FLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFRED 297
           FLDE+GDMP   Q ++LR L +     VG     KVDVR+IAAT++NL   V   +FRED
Sbjct: 240 FLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFRED 299

Query: 298 LFHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGN 357
           L++RLNV  I +P + +R EDI  LARHF    +           +E  + +    WPGN
Sbjct: 300 LYYRLNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGN 359

Query: 358 VRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSN 417
           +R+L+N     T++A+   +   DLP  L +   +   VT         A  +   G   
Sbjct: 360 IRELQNCVERATIVAASPVIEDIDLPGYLFASKPNQGDVT---------AILSDGPGIPQ 410

Query: 418 LLDSAVPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMKVD 468
            LD+A+   E+  I  AL+ + G +  AA  +G    +   ++K+LG++VD
Sbjct: 411 DLDAALAEVEKAYILAALQESNGVQAAAAAKIGISERSFWYRLKKLGIQVD 461