Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

Subject, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  299 bits (766), Expect = 1e-85
 Identities = 176/467 (37%), Positives = 262/467 (56%), Gaps = 39/467 (8%)

Query: 6   TVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLD 65
           TV IV+DD  +    ++AL  E +  +   SA+  + R+      +++SDIR+PG  GL+
Sbjct: 7   TVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLE 66

Query: 66  LLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQHAQE 125
           LL R++ +   LPV+++T H D+D AV + + GA++++ KPF  +  V +V+RA +  Q 
Sbjct: 67  LLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALE--QR 124

Query: 126 QQNQEAPPALTRTPE-------IIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELV 178
             ++E      +  E       IIG +PAM+ +   I  ++ ++  VLI GE+GTGKELV
Sbjct: 125 GLSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELV 184

Query: 179 AHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLF 238
           A  LH  S R + PF+ALN   +P++L ESE+FGHE  AFTGA   R G+ E A+GGTLF
Sbjct: 185 ARCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLF 244

Query: 239 LDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDL 298
           LDE+  MP + Q +LLRVL +    R+G +  + VD R+IAAT  +L+ L  +G+FR DL
Sbjct: 245 LDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQFRSDL 304

Query: 299 FHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNV 358
           ++RLNV+ + +P + +RREDI  L  HFL ++A     E   L S+T   L    WPGNV
Sbjct: 305 YYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGNV 364

Query: 359 RQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSNL 418
           R+L N            E +   LP               +++     A+Q L      L
Sbjct: 365 RELRNVA----------ERYALGLPA--------------FKKGPSGGANQGL------L 394

Query: 419 LDSAVPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGM 465
              AV AFER ++  AL+ T G    A+  LG  + TL  K+K+ G+
Sbjct: 395 FAEAVEAFERNLLTDALQRTGGNLSQASQELGMAKTTLFDKVKKYGL 441