Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  298 bits (762), Expect = 3e-85
 Identities = 167/471 (35%), Positives = 279/471 (59%), Gaps = 27/471 (5%)

Query: 1   MSRSETVWIVDDDRSIRWVLEKALQQEG-MTTQSFDSADGV-MSRLARQQPDVIISDIRM 58
           M  + T+ ++DD+ ++R VL + L+ EG    Q+ ++ +G  +     ++ +V++SD+++
Sbjct: 1   MQTNSTLLLIDDENNLRQVLARVLELEGYQVLQAKNAREGFELLENHAEEVEVVLSDVKL 60

Query: 59  PGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKR 118
           P   GL++L +++E++P   VI+MTA   +   V++ + GAF+YL K  + ++ +  V R
Sbjct: 61  PDDHGLNILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGENDEQLIVTVAR 120

Query: 119 ANQHAQEQQN----QEAPPALTRTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTG 174
           A   A+ ++     ++   A      IIG  PA+++      R++ ++ TVL+ GE+G G
Sbjct: 121 AADKARLRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDSTVLLEGETGVG 180

Query: 175 KELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADG 234
           KEL A A+H  SPR + PF+A+N +A PKDL+ESE+FG++KGAFTGA   ++G FE+A+G
Sbjct: 181 KELFAQAIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEANG 240

Query: 235 GTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKF 294
           GT+FLDEIG+MP + Q + LRVL    F ++G   PVKV+VRI+AAT+++L+    A +F
Sbjct: 241 GTIFLDEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADRF 300

Query: 295 REDLFHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPW 354
           R DL++RL+V +I +P + +R+ DIP LA+HFL     ++    + +  E  + LK+ PW
Sbjct: 301 RPDLYYRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEEFIQKLKHYPW 360

Query: 355 PGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARG 414
            GN+R+L+N      ++A   ++    LP E             W  A    A ++    
Sbjct: 361 KGNIRELKNVMERAVILADEEKLTPEHLPAEF------------WTAAPSLEASES---- 404

Query: 415 QSNLLDSAVPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGM 465
                D+++   ER  I   L+ T G + +AA  L  G  TL RK++E G+
Sbjct: 405 -----DTSLSTVERKHIMKILEQTDGNKTEAARRLHIGLTTLYRKVQEYGL 450