Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

Subject, 469 a.a., fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  636 bits (1641), Expect = 0.0
 Identities = 321/464 (69%), Positives = 375/464 (80%), Gaps = 4/464 (0%)

Query: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66
           VW+VDDD SIRWVLE+AL   G+T  +F++   V+  LA + PDV++SDIRMPG  GL L
Sbjct: 6   VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLAL 65

Query: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQHAQEQ 126
           L +I+++HP LPVIIMTAHSDLD+AV++YQ GAF+YLPKPFD+DEAVALV+RA  H QEQ
Sbjct: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQ 125

Query: 127 QNQEAPPALTRTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHS 186
           Q          T +IIGEAPAMQ+VFR IGRLS S+I+VLINGESGTGKELVAHALHRHS
Sbjct: 126 QQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHS 185

Query: 187 PRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMP 246
           PRA +PFIALNMAAIPKDL+ESELFGHEKGAFTGA  +R+GRFEQADGGTLFLDEIGDMP
Sbjct: 186 PRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMP 245

Query: 247 ADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIR 306
            D QTRLLRVLADG+FYRVGG+ PVKVDVRIIAATHQNLE  V  GKFREDLFHRLNVIR
Sbjct: 246 LDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIR 305

Query: 307 IHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCR 366
           +H+P + +RREDIP LARHFL  AA+EL VE KLL  ETE  L  L WPGNVRQLENTCR
Sbjct: 306 VHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCR 365

Query: 367 WITVMASGREVHISDLPPELL--SLPQDSAPV--TNWEQALRQWADQALARGQSNLLDSA 422
           W+TVMA+G+EV I DLP EL   ++ + ++ +   +W   L QWAD+AL  G  NLL  A
Sbjct: 366 WLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEA 425

Query: 423 VPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMK 466
            P  ER ++ TAL+HT G +++AA LLGWGRNTLTRK+KELGM+
Sbjct: 426 QPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME 469