Pairwise Alignments

Query, 393 a.a., carnitine dehydratase from Pseudomonas simiae WCS417

Subject, 370 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

 Score =  217 bits (552), Expect = 5e-61
 Identities = 136/343 (39%), Positives = 194/343 (56%), Gaps = 30/343 (8%)

Query: 1   MSGPLASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGT-SASH 59
           M+GPL  L+V++ + + PGPF +++ ADMGAEVLRIE P              GT +A H
Sbjct: 1   MAGPLQGLRVIEMAGIGPGPFCAMLFADMGAEVLRIERP--------------GTRTAPH 46

Query: 60  AYLNRNKRSLALDLKQAEALEIVRVLVNDYDILLEQFRPGVMDRLGLGYEALKAINPRLI 119
             L R + +L +DL+ A A + V   ++  D+L+E FRPGVM+RLGLG       NPRL+
Sbjct: 47  DILARGRSTLQVDLRAAGAAQQVLDAIDKADVLIEGFRPGVMERLGLGPAPCHERNPRLV 106

Query: 120 YVAITGYGQTGPYKDRAGHDINYLALAGVASYTGRQDAGPLPLGVQLADVGGGSLHAVVG 179
           Y  +TG+GQ GP    AGHDINY+A++G     GR    P+P    + D GGG++    G
Sbjct: 107 YGRMTGWGQHGPLAHAAGHDINYIAISGALHAIGRAGEPPVPPLNYVGDFGGGAMLLAFG 166

Query: 180 LLAAVIARQQSGVGQYLDVSMTDCSFSLNAMAGAGYLACGVEPEWES----HVLNGGS-F 234
           +LAA+   +QSG GQ +D +MTD +  L+AM   G+ + G   +W +    ++L+GG+ F
Sbjct: 167 ILAALHEAKQSGRGQVVDAAMTDGAALLSAMM-YGFKSAG---QWSNQRGENMLDGGAHF 222

Query: 235 YDYYRSRDGRWMSVGSLEPAF---MQQLCTALGRPELAAQGLSPKPEQQKALKQALQVEF 291
           YD Y   DG+ ++VG++EP F   M++ C     P   AQ      ++   LK  +   F
Sbjct: 223 YDTYACADGKHVAVGAIEPQFYALMRERCGIADDPAFDAQ---MDADRWPVLKLRMADIF 279

Query: 292 EKRSFDELCALFAATDACVEPVLTLSEAVAHPQLKARALVSQV 334
             R+ DE C L   +DAC  PVL   EA AHP   AR   + V
Sbjct: 280 RTRTRDEWCVLLEGSDACFAPVLDWDEAPAHPHNVARGTFASV 322