Pairwise Alignments

Query, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  271 bits (693), Expect = 1e-76
 Identities = 180/520 (34%), Positives = 286/520 (55%), Gaps = 26/520 (5%)

Query: 285 KSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSADNLLGIINEILDFS 344
           K+EFLA +SHEIRTP+NG+LG T LL  + L+ +Q DY+ TI  + + LL +INEILD S
Sbjct: 398 KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDIS 457

Query: 345 KIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALVGDPLRLKQI 404
           K+E+ ++ LD + F+L  L++D L I    A  + +EL+S      P  + GDP RL+Q 
Sbjct: 458 KLESRQIELDDVQFDLNALIEDCLNIFRAKAEQQNIELISFTQPQVPRVISGDPTRLRQA 517

Query: 405 LTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISVQDTGIGLSSQDVRALFQAFSQAD 464
           L++L+ NA+K T +G I+    + D++ +  +LRI+VQD+G  L + D  AL QA   + 
Sbjct: 518 LSSLLENALKNTDQGEILLVVAL-DQRGEVPRLRIAVQDSGEPLPAADREALLQAELHSH 576

Query: 465 NSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISLNLPKTRDDVEDLPS-- 522
           + LS    G  LGLVI+K+LI  M GE G+ S+ G G+  W++L L  +R  +E  P+  
Sbjct: 577 HFLSSNKLGGHLGLVIAKQLIGLMQGEFGIKSSTGMGNTLWLTLPLDPSR--LEQPPADL 634

Query: 523 -APLLGHRVAVLENHELARQALQHQLEDCGLEVTPFNS-LESLTNGITSAHQTEQAIDLA 580
            +PL   RV V+++++  R+ L  Q    G+ V+   S  E+L    T AH  +   D  
Sbjct: 635 DSPLRDARVLVVDDNDTCRKVLVQQCSAWGMNVSAVPSGKEALALLRTKAHLRDY-FDAV 693

Query: 581 VLGVTANDIPPERLNQHLWDLEHLGCKVLVLCPT------TEQMLFNQSVPNPNSQLQAK 634
           +L      +   +L   + +   L   +LV+  T      ++ +  N  V     ++ AK
Sbjct: 694 LLDQNMPGMTGMQLAAKIKEDPSLNHDILVVMLTGISNAPSKVIARNAGV----KRILAK 749

Query: 635 PACTRKLRRALSDLISPRPSR-----SEPGEPLSSRAP---RVLCVDDNPANLLLVQTLL 686
           P     L+  L++ ++ R        S PG P +   P   RVL  +DN  +  +++++L
Sbjct: 750 PVAGYTLKTTLAEELAQRGREQAMPASLPGIPQALDLPGDFRVLVAEDNSISTKVIRSML 809

Query: 687 EDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDGRQSTEAIRQWESERSGTPLPV 746
             +  +     +G  A+ A+K   +DLVLMD +MP +DG  +T+ +R WE+E      PV
Sbjct: 810 GKLNLKPDTACNGEEALQAMKAQHYDLVLMDCEMPILDGFSATQQLRAWEAENQRQRTPV 869

Query: 747 VALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKW 786
           VALTAH +A  K     +GMD ++ KP+   QL +++  W
Sbjct: 870 VALTAHILAEHKERARLAGMDGHMAKPVELSQLRELIQYW 909



 Score = 53.9 bits (128), Expect = 5e-11
 Identities = 52/166 (31%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 653 PSRSE-PGEPLSS--RAPRVLCVDDNPANLLLVQTLLEDMGARVRAVESGYAAIDAVK-- 707
           PSR E P   L S  R  RVL VDDN     ++       G  V AV SG  A+  ++  
Sbjct: 624 PSRLEQPPADLDSPLRDARVLVVDDNDTCRKVLVQQCSAWGMNVSAVPSGKEALALLRTK 683

Query: 708 ---QDTFDLVLMDVQMPGMDGRQSTEAIRQWESERSGTPLPVVALTAHAMANEKRALLQS 764
              +D FD VL+D  MPGM G Q    I+  E       + VV LT  + A  K     +
Sbjct: 684 AHLRDYFDAVLLDQNMPGMTGMQLAAKIK--EDPSLNHDILVVMLTGISNAPSKVIARNA 741

Query: 765 GMDDYLTKPISERQLAQVVLKWTGLALRNQGPERVADGLGPGVQLP 810
           G+   L KP++   L   + +      R Q       G+   + LP
Sbjct: 742 GVKRILAKPVAGYTLKTTLAEELAQRGREQAMPASLPGIPQALDLP 787