Pairwise Alignments

Query, 223 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 260 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 70.1 bits (170), Expect = 4e-17
 Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 42/228 (18%)

Query: 27  YGLLALTLAFSGVMAFVAQQMRV-------------------------GYPNIFVVLIGF 61
           Y L+AL L  +GV AF    +                             P  +VV++  
Sbjct: 34  YNLMALALVITGVAAFGFAMLATTTDPAAAVATLPNGKMLTSLGALVYASPLRWVVMLAP 93

Query: 62  YGL-FFLTNKLRDSAWGLVSA--FALTGFMGFILGPILNRYLGMAGGAEVVSSAFAMTAL 118
            GL FFL+ ++++ +     +  +     MG  L  I  RY   +     +   F +TA 
Sbjct: 94  LGLVFFLSFRIQNMSVSAAQSTFWVYAALMGVSLSSIFLRYTEGS-----IVQTFFVTAA 148

Query: 119 VFGGLSAYVLITRKDMSFLGGFITAGFFVLLAAVVAGMFFQISGLQLAISAGFVLFSSVC 178
            FG LS Y   T+KD+S +G F+  G F L+ A +  +F     LQ AISA  VL  +  
Sbjct: 149 SFGALSLYGYTTKKDLSGIGSFLIMGLFGLIIASIVNIFLGSGALQFAISAIGVLIFAGL 208

Query: 179 ILFQTSAI---------IHGGERNYIMATISLYVSIYNLFISLLQIFG 217
             + T  I         +    R  IM  ++LY+   NLF  LLQ  G
Sbjct: 209 TAYDTQKIKEMYFDADDVAVAGRKAIMGALTLYLDFINLFTFLLQFLG 256