Pairwise Alignments

Query, 285 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 5e-37
 Identities = 100/283 (35%), Positives = 148/283 (52%), Gaps = 9/283 (3%)

Query: 6   EALYPKLIHLMLDTVFVVDSDN-QIVFVSDACEALLGYSANELVG-TLITHYMHPEDLAR 63
           E  + K  H   D + + +  + + + V+D    L GYS +E++G T+    +  +D  R
Sbjct: 536 EEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQR 595

Query: 64  TRA-SIIRVMNGQPHVDFRNRYIRKDGSVVHILWAAFWSEEVGARIGVARDVTALTQAEE 122
           +   + +R      H +   R  R D   V +        EV   +  ARDV+ L  A+ 
Sbjct: 596 SALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQA 655

Query: 123 ELRFLAHHDPLTALTNRSLFNARLDDALKAAQLHNQILALLFLDINDFKGINDVHGHAMG 182
           ++R LA+HDPLT L NR+L   RL   +   + HN   ALLFLD++ FK IND  GH +G
Sbjct: 656 QIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVG 715

Query: 183 DRVLCVIARRLERCVRESDLVARMGGDEFTVLITDIQ-SQDAVAGKVAQIL----AVMAE 237
           D VL +I  RLE  VR  D VAR+GGDEF VL++ ++ S++ V  KV ++      ++AE
Sbjct: 716 DTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAE 775

Query: 238 PLGAEFGGVKMPSCSVGVAFYPADGEDADTLLSHADGEMYRVK 280
           P+  + G     + S+GVA  P  G     LL  AD  +YR K
Sbjct: 776 PMSLD-GQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAK 817



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 24  DSDNQIVFVSDACEALLGYSANELVGTLITHY--MHPEDLARTRASIIRVMNGQP-HVDF 80
           D ++  V  S   +AL G+     +   I +   +  ED ARTR     V+NG+P     
Sbjct: 47  DIESGRVSWSRGTQALFGFDPQRPLPADIDYLDLLPEEDRARTRQVFQAVVNGEPVEQAM 106

Query: 81  RNRYIRKDGSVVHILWAAFWSEEVGAR---IGVARDV-------TALTQAEEELRFLAHH 130
           R+R    DGS+  +      + +   R   IGV R++       TAL  +E+    L H 
Sbjct: 107 RHRIRWPDGSLHWLEINGSLTHDPHGRPQMIGVIREITRQRERETALINSEKRFATLFHL 166

Query: 131 DPLTALTNR 139
            P   L  R
Sbjct: 167 SPNAILLTR 175