Pairwise Alignments

Query, 285 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 831 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  154 bits (390), Expect = 5e-42
 Identities = 98/283 (34%), Positives = 154/283 (54%), Gaps = 13/283 (4%)

Query: 7   ALYPKLIHLMLDTVFVVDSDNQIVFVSDACEALLGYSANELVGT---LITHYMHPEDLAR 63
           +LY  +     + +F  D+ N+I+ V+ A  A+ GY+A E +G    +++   H     +
Sbjct: 32  SLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGNDPRMLSSGFHDPAFYQ 91

Query: 64  TRASIIRVMNGQPHVDFRNRYIRKDGSVVHILWAAFWSE-----EVGARIGVARDVTALT 118
                +    GQ   +  +R+  KDG  V  LW +  S+     +V  RI V RDVT   
Sbjct: 92  EMWDQLST-TGQWQGEVVDRH--KDGRPVR-LWLSITSQRGADGKVARRIAVFRDVTEAR 147

Query: 119 QAEEELRFLAHHDPLTALTNRSLFNARLDDALKAAQLHNQILALLFLDINDFKGINDVHG 178
           +  E+L   ++ DPLT L NR+LF  RL  AL  A      +A+LF+ ++ FK IND  G
Sbjct: 148 ETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGLDGFKNINDSLG 207

Query: 179 HAMGDRVLCVIARRLERCVRESDLVARMGGDEFTVLITDIQSQDAVAGKVAQILAVMAEP 238
           H +GD+VL   ARR + C+R+ D  AR GGDEFTV+++ +++   V   +  +L V+ EP
Sbjct: 208 HWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAVIRSVLEVLQEP 267

Query: 239 LGAEFGGVKMPSCSVGVAFYPADGEDADTLLSHADGEMYRVKR 281
              E   + + SCS+GV  +P DGED D+L+ +A   + + K+
Sbjct: 268 FVVEHHHI-LISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQ 309