Pairwise Alignments

Query, 159 a.a., preprotein translocase subunit SecB from Pseudomonas simiae WCS417

Subject, 154 a.a., Protein-export protein SecB (maintains pre-export unfolded state) from Variovorax sp. SCN45

 Score =  110 bits (276), Expect = 8e-30
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 1   MTDQQNTEAAEAQAPQFSLQRIYVRDLSFEAPKSPAIFRQEWTPSVALDLNTRQKALEGD 60
           M DQQ      AQ P F +QR+Y++DLS E P SPAI  ++  P+V + L    + +   
Sbjct: 1   MADQQ------AQDPVFQIQRVYLKDLSLEQPNSPAILLEQEQPTVDIQLGVDAQPVAEG 54

Query: 61  FHEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIQGLDEASMSHTLGAFCPNILFPYARETL 120
             E+ ++ +V  K  ++  F+ E +QAGIF I+ L E  M   LG  CP I++PY R  +
Sbjct: 55  IFEITVSATVQTKIQDKTVFLVEAKQAGIFEIRHLPEEQMGAILGIACPQIVYPYLRGNV 114

Query: 121 DSLVTRGSFPALMLAPVNFDALYAQELQRMQQEGSSTV 158
             ++ RG FP + LA +NF A+Y Q+  +   + + T+
Sbjct: 115 ADVIQRGGFPPVHLAEINFQAMYEQQQAQAAGQAAPTL 152