Pairwise Alignments

Query, 364 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 356 a.a., ATP-binding component of sn-glycerol 3-phosphate transport system (VIMSS) from Escherichia coli BW25113

 Score =  199 bits (505), Expect = 1e-55
 Identities = 117/350 (33%), Positives = 195/350 (55%), Gaps = 5/350 (1%)

Query: 3   LTLEHVSRVVEGQTW-IDDATLRFEAGSFNVLLGRTLSGKTSLMRLMAGLDKPNSGRILM 61
           L L+ V++  +G+T  I   TL    G F V++G +  GK++L+R++AGL++   G I +
Sbjct: 4   LKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWI 63

Query: 62  NGVDVTQKPVRLRNVSMVYQQFINYPTMTVFENIASPLRQAGVSNELIQSKVLETAKMLR 121
           N   VT+   + R ++MV+Q +  YP M+V EN+A  L+  G+  + I  +V E A++L 
Sbjct: 64  NDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILE 123

Query: 122 IEKFLQRHPLELSGGQQQRTAMARALVKDAELILFDEPLVNLDYKLREELRQEMRELFAA 181
           ++  L+R P ELSGGQ+QR AM RA+V+D  + LFDEPL NLD KLR ++R E+++L   
Sbjct: 124 LDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRR 183

Query: 182 RHTIAIYATTEPNEALALGGTTTILHEGRVIQSGKAAEVYHQPRTVLAAELFSEPPINLM 241
             T ++Y T +  EA+ L     +++ G   Q G   EVY +P ++  A     P +NL+
Sbjct: 184 LKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAMNLL 243

Query: 242 PGRIS--GNEVSFANFVHFPLNVDLRPIGEGEFRFGVRPSHISLVPSNDDDLELAVTVEV 299
            GR++  G        +  PLN   R     +   G+RP HI+L  S+  +  + + ++ 
Sbjct: 244 TGRVNNEGTHFELDGGIELPLNGGYRQYAGRKMTLGIRPEHIAL--SSQAEGGVPMVMDT 301

Query: 300 AEISGSETFLHVRSEHFLLVLHLPGVHEYDVDAPIRVYIPTHKLFVFDGQ 349
            EI G++   H R     LV+ L         + + +++  ++L +FDG+
Sbjct: 302 LEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFDGE 351