Pairwise Alignments

Query, 580 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 579 a.a., putative Sugar ABC transporter, periplasmic sugar-binding protein from Pseudomonas putida KT2440

 Score = 1078 bits (2789), Expect = 0.0
 Identities = 509/578 (88%), Positives = 546/578 (94%), Gaps = 2/578 (0%)

Query: 3   NKNNKLRHSISLAAVLALSGLSASAWADAYEDAAKKWIGSEFKPSTLTAEQQLEELKWFI 62
           NK+N+ RH ++LAA+L L+ +  +AWAD YE+AAKKWIGSEFKPSTLT EQQL EL+WFI
Sbjct: 4   NKHNR-RH-LTLAALLVLASVQGTAWADQYEEAAKKWIGSEFKPSTLTPEQQLAELQWFI 61

Query: 63  KAAEPFRGMKINVVSETLTTHEYESKVLAKAFSEITGIKLTHDLLQEGDVVEKLQTQMQS 122
           KAAEPFRGMKINVVSET+TTHEYESKVLAKAFSEITGI+LTHDLLQEGDVVEKLQTQMQS
Sbjct: 62  KAAEPFRGMKINVVSETITTHEYESKVLAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQS 121

Query: 123 DKNIYDGWVNDSDLIGTHFRYGKTESITDLMANEGKDFTSPTLDIKDFIGISFTTAPDGK 182
           DKNIYDGWVNDSDLIGTHFRYGK ESITDLMANEGK +TSPTLD+KDFIGISFTTAPDGK
Sbjct: 122 DKNIYDGWVNDSDLIGTHFRYGKVESITDLMANEGKAYTSPTLDLKDFIGISFTTAPDGK 181

Query: 183 IYQLPDQQFANLYWFRADWFERPELKAKFKEKYGYDLGVPVNWSAYEDIAKFFSEDVKEI 242
           +YQLPDQQFANLYWFRADWFERPELKA+FKEKYGY+LGVPVNWSAYEDIAKFF+EDVKEI
Sbjct: 182 VYQLPDQQFANLYWFRADWFERPELKARFKEKYGYELGVPVNWSAYEDIAKFFTEDVKEI 241

Query: 243 DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV 302
           DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV
Sbjct: 242 DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV 301

Query: 303 TRGGDTNGPAAVYATQKYVDWMKAYAPPEAAGMTFSESGPVPSQGNIAQQIFWYTAFTAD 362
           TRGGDTNGPAAVYATQKYVDWM+AYAP EA GMTFSE+GPVP+QGNIAQQIFWYTAFTAD
Sbjct: 302 TRGGDTNGPAAVYATQKYVDWMRAYAPKEAQGMTFSEAGPVPAQGNIAQQIFWYTAFTAD 361

Query: 363 MVKPGLPVVNADGTPKWRMAPSPVGPYWEKGMKKGYQDVGSWTFLKSTPEKQKLAAWLYA 422
           M KPGLPVVNADGTPKWRMAPSP GPYWE+GMK GYQD GSWTF KSTPEKQ+LAAWLYA
Sbjct: 362 MTKPGLPVVNADGTPKWRMAPSPKGPYWEEGMKLGYQDTGSWTFFKSTPEKQRLAAWLYA 421

Query: 423 QFVTSKTVSLKKTIVGLTPIRESDINSQAMTDMAPKLGGLVEFYRSPARTEWSPTGTNVP 482
           QFVTSKTVSLKKTIVGLTPIRESDINSQAMT++APKLGGLVEFYRSPAR +W+PTGTNVP
Sbjct: 422 QFVTSKTVSLKKTIVGLTPIRESDINSQAMTELAPKLGGLVEFYRSPARVQWTPTGTNVP 481

Query: 483 DYPRLAQLWWSNIAAAASGEKTPQQALDNLAKEQDAIMTRLERSKVQPVCGPKMNPERDA 542
           DYPRLAQLWWS+IA  ASGEKTPQ+ALD LA++QD +M RL+RS  Q  C PK+NPE+DA
Sbjct: 482 DYPRLAQLWWSHIAEVASGEKTPQEALDGLARDQDRMMERLQRSNAQATCAPKLNPEKDA 541

Query: 543 QYWFDQPGAPKPKLANEKPKGETVNYNDLLKQWEAARK 580
           QYWFDQPGAPK KLANEKP GETV+YN+LLK WEAARK
Sbjct: 542 QYWFDQPGAPKAKLANEKPMGETVSYNELLKSWEAARK 579