Pairwise Alignments

Query, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  167 bits (424), Expect = 2e-46
 Identities = 101/252 (40%), Positives = 134/252 (53%), Gaps = 4/252 (1%)

Query: 12  RSVP--GLSSLPRPVYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTSVGRFVAPPQ 69
           R+VP   + ++ R V       P   +   HSH   Q  Y  +GV+E+ T  G +V PPQ
Sbjct: 2   RNVPLDSVDAIARAVLAIGSDYPPGTMLHTHSHRRAQFLYGATGVMEVGTDDGAWVVPPQ 61

Query: 70  RAVWIPAGVPHRVFSSPHTEMRSLYLDCSVTAWAVERCHVLEVSSLLRELIRSFSELPVE 129
           R VWIPAG PHRV        RSLY++        ++C VL VS LLR+L+    E P E
Sbjct: 62  RGVWIPAGKPHRV-RMLGVSTRSLYIEPRDVPRKGDQCEVLNVSPLLRQLLMEAIEAPAE 120

Query: 130 YAEDGPDGRLAQVVLDQLAAAPQVDLM-LPLPLDPRLRHIYRSLNLRPEQQTTLSQWSQK 188
           Y   G DG L ++VL ++A A  + L+ +PLP DP L  +      RP+     S W+ +
Sbjct: 121 YDRQGRDGVLMRLVLHEVARADALPLLHVPLPRDPALAGLCVEFLRRPDIHAAPSTWAGQ 180

Query: 189 LGVSEKTLSRLFLSDTGLTFRAWRQRLRLLTALPALEQGERVTDVALACGYESTSAFINA 248
           L VSE+T +R F  +TG+ F  WRQR  +L AL  L  GE VT VAL  GY+S  AF   
Sbjct: 181 LNVSERTFNRRFSLETGMAFGKWRQRACVLVALSRLAAGEPVTVVALDMGYDSPGAFSTM 240

Query: 249 FRQQFEATPGEF 260
           FR+     P  F
Sbjct: 241 FRKTLGRPPSHF 252