Pairwise Alignments

Query, 394 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

 Score =  173 bits (438), Expect = 9e-48
 Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 3/376 (0%)

Query: 15  VIALALAAFVFNTTEFVPVGLLSAIGASFDMPVSSVGLMLTIYAWIVSLTSLPVMLLTRN 74
           ++ LAL+AF   TTEFV +GLL  + A   + +   G ++T YA  V++ +  + L T  
Sbjct: 5   LLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAK 64

Query: 75  VERRKLLIVLFCMFIVSHILSSVATSFGILMLSRIGIALSHALFWSITASLAVRLAPEGK 134
           + R+  L+ L  +FI+ ++L ++A+ + +LM +R+  AL H  F+ I + +A  L P  K
Sbjct: 65  LPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANK 124

Query: 135 QVQALGLLATGTSLAMVLGIPLGRLLGEAMGWRTTFLVIGAFAAALVFWLARTLPLLPSQ 194
           +  A+ L+ TG +LA VLG+PLG  LG+  GWR+TF  +       +  L R LP    +
Sbjct: 125 RASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAKRDE 184

Query: 195 NSGSLRSLPLLFKRPALVALYVLTAMTVTAQFTAYSYIEPFVEGVAGMSGSAVTLILLVF 254
               +R+     K   +     +TA+   + FT ++Y+ P +  V G+S   VT  LL+ 
Sbjct: 185 EKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLI 244

Query: 255 GGAGIIGSLLFSLVHRFNPHVFVVGAVFILAACLALLLPLSGAESYLVVLSVF-WGMAIM 313
           G    +G+++   +        ++G VFI  A ++  L  +        +++F W  A  
Sbjct: 245 GLGLTVGNIIGGKLADKRLAATLIG-VFISMAVVSTALTWTSVAVIPTEITLFLWATASF 303

Query: 314 GFGLAMQSKVLVLAPDATDVAMAMFSGIYNIGIGGGALV-GSWVGSQFGFAWIGAAGGLL 372
               A+Q  V+     A ++   +  G +NIG   GA V GS +   FG   +  A  +L
Sbjct: 304 AAVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAVL 363

Query: 373 AALALIGYCLAIRRFG 388
           A LAL+   +  R+ G
Sbjct: 364 AILALLVTLITFRQTG 379