Pairwise Alignments

Query, 394 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  160 bits (406), Expect = 5e-44
 Identities = 115/376 (30%), Positives = 192/376 (51%), Gaps = 23/376 (6%)

Query: 15  VIALALAAFVFNTTEFVPVGLLSAIGASFDMPVSSVGLMLTIYAWIVSLTSLPVM-LLTR 73
           + ALA+ AF   TTEF P+GLL  I    ++ + S G+++T YA I  +   P+M LL  
Sbjct: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYA-IGVMVGAPIMTLLFS 70

Query: 74  NVERRKLLIVLFCMFIVSHILSSVATSFGILMLSRIGIALSHALFWSITASLAVRLAPEG 133
              +R  L+ L  +F + ++LSS++  +  L+ SR+  +L+H  F+ + A +A  + P+ 
Sbjct: 71  RFGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKE 130

Query: 134 KQVQALGLLATGTSLAMVLGIPLGRLLGEAMGWRTTF---LVIGAFAAALVFWLARTLPL 190
           KQ  A+  +  G ++A + G+P    +G+ +GWR  F    V+G  A A   W A     
Sbjct: 131 KQASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMA-ALWYA----- 184

Query: 191 LPSQNSGS---LRSLPLLFKRPALVALYVLTAMTVTAQFTAYSYIEPFVEGVAGMSGSAV 247
           LP    GS   +R    +  RP+++     T +   A FT Y+Y+ P +  + G S   V
Sbjct: 185 LPKGERGSVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFV 244

Query: 248 TLILLVFGGAGIIGSLLFSLVHRFNPHVFVVGAVFILAACLALL---LPL-SGAESYLVV 303
           TL L++ G    +G+ L   +  ++    + GA  I  A LAL+   +PL  G+     +
Sbjct: 245 TLGLVLIGVGFTLGNSLGGRLADWS----LDGAAKIFLAVLALIMLAMPLVLGSHIGAAI 300

Query: 304 LSVFWGMAIMGFGLAMQSKVLVLAPDATDVAMAMFSGIYNIGIG-GGALVGSWVGSQFGF 362
             + WGM        +Q +V+  A +A  +A ++  G +N+G   G AL G+ +    G+
Sbjct: 301 ALLVWGMFTFAVVPPLQMRVMTAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGY 360

Query: 363 AWIGAAGGLLAALALI 378
           A +  AGG+LAA  L+
Sbjct: 361 AAVPMAGGVLAAAGLL 376



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 223 TAQFTAYSYIEPFVEGVAGMSGSAVTLILLVFGGAGIIGSLLFSLVHRFNPHVFVVG--A 280
           T +FT    +    +GV     SA  LI     G  +   ++  L  RF     ++   A
Sbjct: 24  TTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSRFGKRAALMALMA 83

Query: 281 VFILAACLALLLP-LSGAESYLVVLSVFWGMAIMGFGLAMQSKVLVLAPDATDVAMAMFS 339
           +F L   L+ L P      +  +V S+  G A  G G  + + V+     A+ VA  MF 
Sbjct: 84  IFTLGNLLSSLSPDYYTLLASRLVTSLNHG-AFFGLGAVVAASVVPKEKQASAVA-TMFM 141

Query: 340 GIYNIGIGGGALVGSWVGSQFGF--AWIGAAGGLLAALALIGYCL 382
           G+    IGG     +W+G Q G+  A+ G A   L A+A + Y L
Sbjct: 142 GLTIANIGG-VPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYAL 185