Pairwise Alignments

Query, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 19/308 (6%)

Query: 4   RRPLAAVAGLLAFSVA-VSAEAQE--TVRIGYQKSSTLITLLKTQGTLEKALKADNIDVS 60
           RR L ++ GL + +++  SA A E  T+ +G Q  S  I L      L   LK     + 
Sbjct: 4   RRTLLSLLGLASLALSGTSAGAAEPLTLTVGDQFFSNRIVL-----ELSGELKDLPYKID 58

Query: 61  WHEFPSGLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKD 120
           +  F +G P+  A+  G +D+   V DT  I   A  A +   A    S     IV RK 
Sbjct: 59  FKRFNTGSPVASAVASGALDVGI-VGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG 117

Query: 121 SPIQQLADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGRAAFENNKVD 180
             I  +ADL+GK +A+   + +  L   AL + G+  S +   YL PA+   A     +D
Sbjct: 118 --IHSVADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDID 175

Query: 181 AWVTWEPFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHPDVLKVVYAQLEKTGQ 240
           A+ TWEP++ S+Q +  +  + +  GL S   Y +   P       ++K   A+L +  Q
Sbjct: 176 AFGTWEPYV-SLQEKEGSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQ 234

Query: 241 WVKTHPQDAAKVLGPLWGNLDVATVEAANA---HRSYQVQPVTIDQLGEQQKIADAFFKA 297
           W  TH  + A+     W   + +  E A       + +V P++   + E Q  AD    A
Sbjct: 235 WSNTHVDEYAEA----WSKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDA 290

Query: 298 GLLPKAVD 305
            +L +  D
Sbjct: 291 QMLKQRYD 298