Pairwise Alignments

Query, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 320 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  387 bits (993), Expect = e-112
 Identities = 195/311 (62%), Positives = 236/311 (75%), Gaps = 1/311 (0%)

Query: 4   RRPLAAVAGLLAFSVAVSAEAQETVRIGYQKSSTLITLLKTQGTLEKALKADNIDVSWHE 63
           R  L A+  L A +      A   VR+GYQKSSTLI +L+ QGTLE+ L+   + +SWHE
Sbjct: 9   RAALGALGSLAAGAALAQGNAPRAVRLGYQKSSTLIAVLRLQGTLEQRLEPLGVKLSWHE 68

Query: 64  FPSGLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKDSPI 123
           F SGLPLLEALN+ N+D SADVADTVP+FAQAA A+LT+ AQEAPSP+AQAIVVR DSP+
Sbjct: 69  FTSGLPLLEALNLDNLDFSADVADTVPVFAQAAGAQLTFVAQEAPSPTAQAIVVRADSPL 128

Query: 124 QQLADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGRAAFENNKVDAWV 183
           + +ADLKGK++A  KAAG HYLLIAAL + GL FSDI PAYL+PADGRAAFE   VDAWV
Sbjct: 129 KSVADLKGKRVAFAKAAGAHYLLIAALEKAGLSFSDIDPAYLTPADGRAAFEKGAVDAWV 188

Query: 184 TWEPFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHPDVLKVVYAQLEKTGQWVK 243
            W+PFL++ Q+Q   R LADG GLASY+RYYL  T +A+A PDVL V+YA+LEKTG+WVK
Sbjct: 189 VWDPFLSAAQKQAGARVLADGTGLASYQRYYLASTRFAQARPDVLGVIYAELEKTGRWVK 248

Query: 244 THPQDAAKVLGPLWGNLDVATVEAANAHRSYQVQPVTIDQLGEQQKIADAFFKAGLLPKA 303
            +P++AA +L P WG LD A VE AN  RSY V+PVT   + EQQKIADAF    LLP+ 
Sbjct: 249 QNPKEAAALLAPFWG-LDAAIVEQANGRRSYAVRPVTPQNITEQQKIADAFLAEKLLPRR 307

Query: 304 VDAKDVQTWKP 314
           V+A DV  +KP
Sbjct: 308 VNAVDVPLFKP 318