Pairwise Alignments

Query, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 319 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  210 bits (535), Expect = 3e-59
 Identities = 125/309 (40%), Positives = 179/309 (57%), Gaps = 8/309 (2%)

Query: 9   AVAGLLAFSV-AVSAEAQ-ETVRIGYQKSSTLITLLKTQGTLEKALKADNIDVSWHEFPS 66
           A+AGLL+ S  AV+AE+  E +RIGYQK S  + L K+   LEK      I  SW EFP+
Sbjct: 8   ALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKI--SWVEFPA 65

Query: 67  GLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKDSPIQQL 126
           G  +LEALNVG++D+ +   D  PIFAQAA A L Y   E P P A+ I+V ++SPI+ +
Sbjct: 66  GPQMLEALNVGSIDLGS-TGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTV 124

Query: 127 ADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGRAAFENNKVDAWVTWE 186
           ADLKG K+A  K + +H LL+ AL Q GL+F+DI P YL+PAD RAAF+   VDAW  W+
Sbjct: 125 ADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWD 184

Query: 187 PFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHPDVLKVVYAQLEKTGQWVKTHP 246
           P+ ++   Q   R L DG  L     +YL   PYA+ +   ++ V A   +     ++  
Sbjct: 185 PYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQR 244

Query: 247 QDAAKVLGPLWGNLDVATVEAANAHR-SYQVQPVTIDQLGEQQKIADAFFKAGLLPKAVD 305
           + +  +L    G L    + +   HR    ++PV  +    QQ+ AD F++  L+PK VD
Sbjct: 245 EQSIALLAKTMG-LPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVD 303

Query: 306 AKDVQTWKP 314
            +  + W+P
Sbjct: 304 IRQ-RIWQP 311