Pairwise Alignments

Query, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 15/308 (4%)

Query: 2   TFKKLIVAASLLFAATAAHAEQ--TLDISYQRSSTLWILLKQNGHLEQRLKPLGFTVNWH 59
           T   L+  ASL  + T+A A +  TL +  Q  S   +L      L   LK L + +++ 
Sbjct: 6   TLLSLLGLASLALSGTSAGAAEPLTLTVGDQFFSNRIVL-----ELSGELKDLPYKIDFK 60

Query: 60  EFSTG--LLSSLNAGSVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIVQDQSP 117
            F+TG  + S++ +G++D+   V D   +   A  AP+   A   +S     I+ +    
Sbjct: 61  RFNTGSPVASAVASGALDVGI-VGDTPVISLAANGAPVKVVASTQTSLDGVGIVAR--KG 117

Query: 118 IHSIADLKGKTVAVSKGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANGSVDAW 177
           IHS+ADL+GKTVA+  GS S  L   AL +AG+  + +  +YL   +   A   G +DA+
Sbjct: 118 IHSVADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAF 177

Query: 178 VIWDPFLATQQLDHHVRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQW 237
             W+P+++ Q+ +    +I + K GL     + +A          +++     L    QW
Sbjct: 178 GTWEPYVSLQEKEGST-LIRNAK-GLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQW 235

Query: 238 VKAHPKEAAEILGPLWGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYAAKLIP 297
              H  E AE         AP   +    R +  ++P+    ++E Q  AD    A+++ 
Sbjct: 236 SNTHVDEYAEAWSKA-NQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQMLK 294

Query: 298 KPLKVSAI 305
           +   V+ +
Sbjct: 295 QRYDVAPL 302