Pairwise Alignments

Query, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 326 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

 Score =  129 bits (323), Expect = 1e-34
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 15  AATAAHAEQTLDISYQRSSTLWILLKQNGHLEQRLKPLGFTVNWHEFSTG--LLSSLNAG 72
           A  +A     L    Q+   L +L    G     L+ LG+ + W EF     L  +LNA 
Sbjct: 33  ALVSAQGRPVLKAGDQKGGLLALLEAAGG-----LEGLGYDIQWSEFPAAAPLAEALNAA 87

Query: 73  SVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIVQDQSPIHSIADLKGKTVAVS 132
           +VD    + DA  +F  AA   +       S S   A++V+  SP+ +  DL+GK+VA +
Sbjct: 88  AVD-SGPIGDAPLIFALAAGTRVKAIGANRSDSYGTAVLVRPDSPLKAAGDLRGKSVATN 146

Query: 133 KGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANGSVDAWVIWDPFLATQQLDHH 192
           +GS  HY+ + A+  AGL   D+  R+L   D   A   GSVDAW  W+P+ A  ++ +H
Sbjct: 147 RGSIGHYVTLKAITAAGLKPEDVNIRFLAPADAKLALTQGSVDAWATWEPYTALAEVSNH 206

Query: 193 VRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQW----VKAHPKEAAEI 248
            RV+  G+ GL     +  AT     A   VLQ     + +   W    V A+    A I
Sbjct: 207 ARVLVSGR-GLLPGLSYLAATDSAIAAKRPVLQDFLQRVVKAQLWSYRNVDAYSAALARI 265

Query: 249 LGPLWGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYAAKLIPKPLKV 302
           +G     I P   +    RR    + +  + +++QQ  AD Y    LI +PL V
Sbjct: 266 IG-----IPPEAAKLQFERRQQKWVAIDAQVISDQQGTADFYRQVGLIKQPLDV 314