Pairwise Alignments

Query, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

 Score =  195 bits (496), Expect = 1e-54
 Identities = 116/291 (39%), Positives = 160/291 (54%), Gaps = 7/291 (2%)

Query: 14  FAATAAHAEQTLDISYQRSSTLWILLKQNGHLEQRLKPLGFTVNWHEFSTG--LLSSLNA 71
           FAA A    +   I  Q+      LLK  G LE+RL PLG +V W EF+ G   L +LN 
Sbjct: 24  FAALAQAPARQFRIGNQKGYLT--LLKGRGTLEKRLAPLGVSVKWTEFTAGPVQLEALNV 81

Query: 72  GSVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIVQDQSPIHSIADLKGKTVAV 131
           GS+D   DV +A  +F QAA APL Y         ++A++V   S I ++A+LKGK +A+
Sbjct: 82  GSIDF-GDVGEAPPIFAQAAGAPLAYVGATVVRPQSEAVLVPKASAIKTVAELKGKKIAL 140

Query: 132 SKGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANGSVDAWVIWDPFLATQQLDH 191
           +KGS  HY ++    K GL+ AD+   YL   D  AAF  GSVDAWVIWDPFLA  +   
Sbjct: 141 NKGSNVHYFIVKLFEKHGLSYADLNLVYLPPADARAAFEKGSVDAWVIWDPFLAAAEKSL 200

Query: 192 HVRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQWVKAHPKEAAEILGP 251
             R++AD   G+     +Y ++  +   + DVL +  + L +   W  A+  E A  L  
Sbjct: 201 DARILADA-TGVVGNRAYYFSSLDYVAKNADVLAIAIEELNKIDVWGAANKAELAGELAA 259

Query: 252 LWGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYAAKLIPKPLKV 302
           LWG   P   E + +R +Y   P+    LAEQQ+IADT++  KLIPK + V
Sbjct: 260 LWGLPKP-VAELSVNRSAYGTTPITKAILAEQQKIADTFFDLKLIPKKINV 309