Pairwise Alignments

Query, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  341 bits (875), Expect = 1e-98
 Identities = 181/318 (56%), Positives = 228/318 (71%), Gaps = 11/318 (3%)

Query: 1   MTFKKL------IVAASLLFAATAAHAEQTLDISYQRSSTLWILLKQNGHLEQRLKPLGF 54
           MTFK L      ++A++LL   + A AEQTL I YQ+SSTL  LLK  G LEQRL+  G 
Sbjct: 1   MTFKPLRQLGLALLASALL--PSLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGI 58

Query: 55  TVNWHEFSTGL--LSSLNAGSVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIV 112
            V WHEF +GL  L +LN G+VDL ADVAD   +FTQAA A LTY+A+E  S +AQAI+V
Sbjct: 59  RVTWHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILV 118

Query: 113 QDQSPIHSIADLKGKTVAVSKGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANG 172
              SP+ ++ADLKGK VAV+K +GSHYLLI AL KAGLT  DITP YL   DG AAF N 
Sbjct: 119 PADSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENH 178

Query: 173 SVDAWVIWDPFLATQQLDHHVRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLR 232
            VDAWV WDP++A+ Q   + R++ DG + LA Y R+Y+A + +AKAHP+VLQ  +  LR
Sbjct: 179 KVDAWVTWDPYVASAQRQQNARILVDGSE-LASYQRYYLAGSDYAKAHPEVLQQVYLALR 237

Query: 233 ETGQWVKAHPKEAAEILGPLWGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYA 292
           E G W KA+P+ AA ILGPLWGN+  ATV++AN+RRSYD+ PVK++NLAEQQRIAD +Y 
Sbjct: 238 EAGAWTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADAFYR 297

Query: 293 AKLIPKPLKVSAITVWTP 310
             L+PK +  SA+ V+ P
Sbjct: 298 EGLLPKAVDTSAVDVYQP 315