Pairwise Alignments

Query, 329 a.a., sulfonate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

 Score =  395 bits (1015), Expect = e-115
 Identities = 193/312 (61%), Positives = 234/312 (75%), Gaps = 3/312 (0%)

Query: 21  GVAVVGAWLAVALLISFWPNAT---RNWPMTQGLANLCVGIAGLYVVLSLLGRTVSKLGQ 77
           G+    AW+A+ LL   WPN      +W  T+      + +A L + +S+LG    +L Q
Sbjct: 44  GLLAAAAWVALGLLTLLWPNKEVGFSDWAFTREFGVAALVVAALLLAVSVLGARAGRLAQ 103

Query: 78  RLRNAGPWLIALPVLLGGWELLTAKLALLPVPFFAPPQALLAVYIEDYARLADSLLHSAL 137
            LR AG WL+AL V+L  WE  TAKL LLP PFFAPPQ+L+ V  ED+ RL  S  +S  
Sbjct: 104 ALRPAGQWLVALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVHEDWQRLGLSTAYSLR 163

Query: 138 LLGSGVALGTITGFIAGVAIGWSTRIGYWLHPVLRILGPVPSTALLPLCFFLFPSSWSAS 197
           LL +G  LG + GF  GVA+GWS   GYW+HP+LR LGPVP++ALLPL FF  PSS+SA+
Sbjct: 164 LLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSAA 223

Query: 198 VFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGAKQGFLIFKVAIPAALPHVFVGLFM 257
           VFL+ LAT+FPV VLTWSGVASV K+YYDVARTLGA + FL+ +VAIPAALP VFVGLFM
Sbjct: 224 VFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLFM 283

Query: 258 GLGASFSTLVVAEMMGVKSGIGWYLQWAQGWAAYANMYAALLIMALACSGLITGLFLVRD 317
           GLGASFS L+ AEMMGVK+G+GWYLQWAQGWAAYANMYAAL +MA+ CSGLIT LF VRD
Sbjct: 284 GLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKVRD 343

Query: 318 RLLAWQKGSMKW 329
           R+L+WQKG++KW
Sbjct: 344 RVLSWQKGTVKW 355