Pairwise Alignments

Query, 329 a.a., sulfonate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 1e-26
 Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 8/236 (3%)

Query: 80  RNAGPWLIALPVLLGG---WEL---LTAKLALLPVPFFAPPQALL--AVYIEDYARLADS 131
           RN   W + L  LL     W++   +   L LL   +   P+A+L  A  +   + L   
Sbjct: 3   RNLKRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAH 62

Query: 132 LLHSALLLGSGVALGTITGFIAGVAIGWSTRIGYWLHPVLRILGPVPSTALLPLCFFLFP 191
           L  S   + +G A   + G   G+ IG S      L P L +L P+P+ A +PL   +FP
Sbjct: 63  LGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFP 122

Query: 192 SSWSASVFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGAKQGFLIFKVAIPAALPHV 251
           SS  + VF+      FP+ + T  GV +VD      AR+LGA +  ++ +V +P ALP +
Sbjct: 123 SSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSI 182

Query: 252 FVGLFMGLGASFSTLVVAEMMGVKSGIGWYLQWAQGWAAYANMYAALLIMALACSG 307
             GL +G+G S+  LV AEM+  + GIG+Y   +     Y ++   +L++ +   G
Sbjct: 183 VTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMG 238